Hippocampus comes (tiger tail seahorse): 109525208
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Entry
109525208 CDS
T04969
Name
(RefSeq) putative exonuclease GOR
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109525208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcq03009
]
109525208
Ribosome biogenesis [BR:
hcq03009
]
Eukaryotic type
Pre-60S particles
RNases
109525208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
KIX_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
109525208
NCBI-ProteinID:
XP_019741088
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MFQSSGLFARVPCPFPRRCCKRPHCWYKHPEDGGRLLGYSSPSSSWWSLPPIELTGAQDG
IQSTLCTPQVVDYAKDKSFQELEHINKKIETAKYEVEKEQRKLSCYRAVEGEHTNGCWYI
RPNRIKAPTQSRKYVLDNSKPRTDLEYDPMSNFTAEFRSYKSSSLALKGKEVHQVDLKKP
VSHHVAPYCSPSSEIQDDAYDDDVLIIDIPDSPNRKLAQAHCDLDTVSTPVQENSRNKDR
KASASSVVELIECVEDFTSKSPNHKVSCFQSTEVEPDHISDEDNETVCVKVPKCLETKRH
TAECQLPKKTEERQESICTIPNSHQESAEASPGSSQLSIEILSSPKESFSLKAASDTVII
INSSSDEDEEEMDVELSDSDPVAECYRIFMEANNQEGGGDQEQPEAPMEPKDVEKPNQPD
IPAIKPQELPAKRRIAHESKDAEVAAVKRRPQVQVLVPLRGPVKASPASQLVGGVPKIQQ
VQQKAAILTAALKGGQAFLSSVGQRKPMPAPLSVPHPSTPPAATVNTSPAHQQKVCVKYI
PMGSAVLNVDNNMRLILPPGTLPPNSTSSEVTPVLTPITQVCLGPITGKTLSVPAQTYRS
TAPLLIPAAARRPSQSYSAVSVPTATSKTPSQAAMKPGATKRKAKQQSEATKEKVPHDIR
QRYVTQFTEAFLDTSADIDEAFKKALAEEKTVYNRSVNKLKYLSIAVNALKRLKKQNSVT
CSDEKANGKNPKGNIPLNRKQLKGNDDASLYEILRDYVLSEEQLIESNYPVHHPEKPGCA
VLFANNKKGGNDPLKRICCRCGATYSVNKAGKHTRTEECNYHYGKGVENRVPGGVETRYS
CCQGVMGAPGCQIFKLHVHDSLTMDGFVSTIPRRPADSSCPGVYALDCEMCYTIHGLELS
RVTVVDSSLQVVYDAFVKPHDEVIDYNTRFSGINEEDVKANHVSLAEVQKTLLSFISADT
ILIGHGLETDFCALKLLHGTVVDTAAVFPHRLGPPHRLSLSSLTAEHLTRIIQESVCGHD
TAEDAAACMELMLLKGKDGKMKRNDGKNTSNPPTNCT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttccagtcgtctggcctcttcgcccgggtgccctgtcctttccccaggcgctgctgc
aaacgcccccattgctggtacaaacatcctgaggacgggggacgtttgttaggttactcc
tcgccgtcgtcgtcatggtggtcattaccgcctatagaactaacaggtgcccaagatggc
attcagtccaccttgtgtacgccacaagttgtagactatgccaaagataagtccttccaa
gagctggaacacatcaacaagaagatcgaaacagctaagtatgaagtagagaaggagcag
aggaagctgtcatgctaccgtgcagtagaaggtgaacatacaaatggctgttggtatata
cgccccaataggatcaaagcacccacccaatcgaggaagtacgtgcttgacaattccaag
ccaaggaccgacttggaatacgatcccatgtccaacttcactgccgaattcaggtcatac
aagtcgtctagtctggcgctgaaagggaaagaggtgcaccaagttgatttaaaaaagcca
gtcagccatcacgtggcgccgtattgctctccatcctctgagatacaagatgacgcctac
gatgatgacgtcctgataattgacataccagactcacctaacaggaagttggctcaagct
cactgtgatcttgatactgtcagcacgccagtgcaggagaattcccggaacaaagatcgc
aaagcatcagcttcaagtgtggttgagctgattgagtgtgtggaagacttcaccagcaag
agtcccaatcacaaagttagttgttttcagtccactgaagttgaaccagatcacatttcg
gacgaggacaacgagacggtttgcgtcaaggttccaaagtgcttggagacgaagcggcac
accgcagagtgccagctacccaagaagacagaagaacgtcaggaatcaatctgtactata
ccaaacagccaccaggagtcagcagaggcctccccgggcagcagccagctttcaatagaa
atcctctcatctcccaaagagagtttttctttgaaagcagccagtgatacggtcatcatc
atcaattccagctcagacgaagatgaagaagagatggatgtggagctgtctgacagcgac
cctgtggcggagtgttaccgcatcttcatggaggcaaacaaccaggaaggtggcggtgat
caggagcagccagaggcgcctatggaaccgaaggatgtggagaaacccaaccaacctgac
attccagccatcaaaccgcaagaactgccagcgaagaggaggatcgcacatgaatccaaa
gatgcagaggttgcagcagtgaaaaggaggccgcaggttcaggtgctggttccattacga
ggaccagtgaaagcatccccagcctctcagcttgttggcggtgtgcccaagattcagcag
gtccagcagaaggcggccattttgacagctgccctgaaaggaggccaagcgttcctttcg
tccgttgggcaaaggaagcccatgcctgctcctctttcagtgcctcatccttcaactcct
cctgcagcgactgtcaacacttcgcctgctcatcaacagaaagtgtgcgtcaaatacata
cctatgggctccgccgtcctcaacgtggacaacaacatgcgcctgatcctccctccgggc
acactgcctcccaactccacctccagcgaggtaaccccagtccttacccccatcactcaa
gtgtgcctgggccctatcactggcaaaacgctgagcgtcccagcgcagacgtatcgctcc
actgcgcctctgctcattcctgccgccgcacgaagaccctcccagtcctactctgcggtg
tctgttccaaccgccaccagtaaaacgcccagccaagccgctatgaagccaggagccacc
aaacgaaaagcaaagcagcagagcgaggctaccaaagagaaagtgccccatgacatccga
cagcgctacgtcacccagttcacggaggcgttcctcgatacgtccgccgatatcgacgag
gccttcaaaaaggccctagctgaggagaaaactgtgtacaatcgcagtgtcaacaagctg
aagtatcttagcattgctgtgaatgcgctgaagagattaaaaaagcagaattctgtcact
tgcagtgatgagaaagccaatgggaaaaatcctaaaggaaatattccactaaaccggaag
cagctcaaaggaaatgatgacgcttctttgtatgagattttaagggattacgttctaagt
gaggagcagctgattgagagtaactatcctgtccaccaccctgagaaacccggctgcgct
gtccttttcgccaacaataagaagggcggcaacgaccccctgaagaggatttgctgtcgg
tgcggagccacatactctgtgaacaaagcgggcaagcacacccgaacggaagagtgcaac
tatcactatgggaaaggagtggagaacagagtgccaggcggggtggagactcgctacagc
tgctgtcagggagtcatgggagcacccggttgccaaatttttaagttgcatgtgcacgat
tcccttaccatggatggatttgtatcaaccatccccagacgtcctgcagatagcagctgc
cccggagtctacgcgttggactgtgaaatgtgttacactattcacggtttggagctgtcg
cgagtgacagtggtggactcgagcctccaagtggtatacgacgcatttgtcaagccacac
gatgaggtcatcgactacaacaccaggttttcgggcatcaatgaggaggacgtgaaggcc
aaccacgtgtctctggcagaggtgcagaagaccttattgagcttcatcagtgctgacacc
attctgattggccatggcctcgagacagatttctgcgccctcaagttgctccacggcacg
gtggtggacacggcagcggtcttcccccaccgcctgggcccccctcacagactgagcctc
agcagcctcacagcagaacacctgaccaggatcatccaagagagcgtgtgtggccacgac
acggcagaagatgccgctgcctgcatggagctcatgttgctgaagggcaaagatggcaaa
atgaaaagaaatgatggcaaaaacacatcaaacccacccacaaattgcacatag
DBGET
integrated database retrieval system
