Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0386
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Entry
HDEF_0386 CDS
T00911
Symbol
kdsA
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid 8-P synthetase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde00540
Lipopolysaccharide biosynthesis
hde01100
Metabolic pathways
hde01250
Biosynthesis of nucleotide sugars
Module
hde_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HDEF_0386 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
HDEF_0386 (kdsA)
Enzymes [BR:
hde01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HDEF_0386 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
hde01005
]
Lipid A
HDEF_0386 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ACQ67142
UniProt:
C4K3J9
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All DBs
Position
390285..391118
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AA seq
277 aa
AA seq
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MNNKVIHFQHINIANHLPFVLFGGMNVLESRDLAMRICEHYVRITNQLNIPYVFKASFDK
ANRSAVHSYRGPGLEEGMKIFEELKHSFGVAIITDVHEVSQAKIVSEVVDVIQLPAFLAR
QTDLVVAMAETKAVINVKKPQFMSPMQVGHIVEKFKQAGNEKIILCERGNIFGYDNLVVD
MLGITLMAKSTGGHPVILDVTHALQCRDPFGSVSGGRRAQVSELARAGMAVGLAGLFLEA
HPDPQNAKCDGPCALPLHKLLPFLTQMKAIDDLIKNF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataaagtgattcattttcaacatattaacattgccaatcatcttccatttgta
ttatttggtggtatgaatgtgcttgaatcacgtgatctggcaatgagaatttgtgaacat
tatgttcgaatcaccaatcaattaaatatcccttacgtttttaaagcgtcttttgataaa
gcaaatcgttctgctgttcattcttatcgtgggcccggtttagaagaaggcatgaaaata
tttgaagaattaaaacactcttttggcgtagccatcatcacagatgtacacgaagtgagc
caagccaaaatagtttctgaagtagttgatgttattcaattacccgcgtttttagcgcgt
caaaccgatctcgtggtggccatggctgaaacaaaagcggtgattaatgtcaaaaaacct
caatttatgagccccatgcaagtaggccacattgtcgaaaaatttaaacaggctggaaac
gaaaaaattattctttgtgagcgaggaaatatttttggttacgataacttagtggtggat
atgttagggatcacactcatggcaaaatctacaggagggcatcctgtcatactcgatgtc
acccatgccctgcaatgcagagacccttttggatctgtttctggcgggcgcagggctcag
gtttcagaactggcaagagcaggcatggccgtgggattagcgggcttatttttagaagca
catcccgaccctcagaatgcaaaatgcgatggcccttgcgctttaccactacataagctg
ctgccttttttaacacagatgaaagcgattgatgatttgattaaaaatttttaa
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