Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0539
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Entry
HDEF_0539 CDS
T00911
Name
(GenBank) ABC-type antimicrobial peptide transport system, permease
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HDEF_0539
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hde02000
]
HDEF_0539
Transporters [BR:
hde02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
HDEF_0539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
ABC2_membrane_3
AAA_21
SMC_N
AAA_16
RsgA_GTPase
DUF4396
AAA_13
MMR_HSR1
AAA_29
AAA_22
nSTAND1
DUF4064
Motif
Other DBs
NCBI-ProteinID:
ACQ67292
UniProt:
C4K3Z9
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All DBs
Position
complement(536225..538228)
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AA seq
667 aa
AA seq
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MRGNSHVRFLREWALAACLPNQSVRRSYQSGEESLDVLKNISLKIYSGELVAIIGASGWG
KSTLMNILGYLDQATSGTYYIAGQNVVDLNNDDLAILRREYFGFIFQRYHLLPHLSAAHN
VEIPAIYAGSPKNERKKRAVTLLTRLGLGERINYRPNQLYQLSGGQQQRVSIARALMNGG
QIILADEPTGALDSHSSVEVMNILKQLQQKGHTVIVVTHNPEVANQADRTIEIKDGEIIS
DSGYQPTQELKKAPEPSSPSVEQASCQQWVGRLHEALLMAWRAMLSNKMRTALTMLGIII
GIASVVSILVVGDAAQQKVLANIRAIGTNTISIYPGRDYGDDDPSNRQALIYEDIAALQA
QSYISAISPIISGNIRLRSGNIDVASTILGVGGQYFKAYGIKIQNGERILERQVRDQSQV
VVIDKNTQRRLFPRTKDVIGKEILVGNIPMTVVGIAKEKQSMYGNNNALRIWIPYSTMTN
LFTGRSYFDAITVRIKEGYNNNEAEQQLIRLLTLRHGKKDIYTFNVNTVLKTAEKTTRTM
QLFLSLVAAISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARSSDVLQQFLIEAVLVCL
VGGTIGILLSFCIGFAVEFFLPTWSLTFSSIALFIAFFCSTMIGIVFGYLPARHASRLNP
IDALAPE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtaactcgcacgtacggttcttgagggagtgggcacttgcggcctgcttacct
aatcaatctgtaagacgaagctatcagtcaggagaagaaagccttgatgtactaaaaaat
atttctttaaaaatttattcaggggaactggtggcgatcataggggcttcaggctggggt
aaatccactttaatgaacatattaggctacctggatcaagccactagtgggacctactat
attgctgggcaaaatgttgtagatctcaacaatgatgatttggcaatattacggcgtgaa
tattttggttttatttttcagcgatatcatctactcccgcatctgagtgcagcccataac
gttgaaatacccgctatctatgcaggatctcctaaaaatgagcgcaaaaaaagagccgtc
acgctgctgacccgtcttggattaggcgaacgcattaactatcgaccaaatcagctttat
cagctttcaggagggcaacaacaacgagtcagtatcgcgcgagcattgatgaacggcggg
caaattatcctggctgatgaacctacaggcgcgcttgacagtcattccagtgttgaagtc
atgaatattctcaaacagcttcaacaaaaaggtcataccgtcattgtggtgacacataac
cctgaagtggcaaatcaagctgatcgtactattgaaattaaagacggcgagataatttcc
gattcaggatatcaacccacacaagaacttaaaaaagcacctgagccctcaagcccgtca
gttgaacaggcttcctgtcagcaatgggtaggccgccttcatgaagcattgctgatggcc
tggcgtgccatgctatccaataaaatgcgaaccgcattaaccatgctggggatcattatt
ggtattgcgtcagtggtctcaattttggtggtaggggatgctgctcagcaaaaagtttta
gcgaatatcagagcgatagggactaacactattagtatttaccctggtagggactacgga
gatgatgatcccagtaatcgacaggcattaatttatgaggatattgcagcgctacaggca
caatcctatatcagtgctatttctcctattatctcaggcaacatacgccttcgttcagga
aatatagatgttgcgagcacaattttaggggttggaggccaatactttaaggcttacggc
atcaagatccaaaatggagaaaggattttagaaagacaggtgagagaccaaagccaggtg
gtggtcatcgataaaaatactcaaaggcgtttatttcctcggacgaaagatgtgatagga
aaagaaatattagtggggaatatcccaatgaccgttgttgggattgctaaagaaaaacaa
tctatgtatggaaacaacaatgctttaagaatctggataccttacagtactatgacaaac
ctcttcaccggccgctcttattttgatgcgattacagttcgtatcaaggagggttataac
aataatgaagcagagcaacaattaatacgattattgactttacgccatggtaaaaaagac
atttacacgtttaacgtaaacacagtattgaaaacagctgaaaaaactacccgtaccatg
caactctttttgtctttagtagcagctatttctttagtcgtagggggtattggtgtgatg
aacatcatgttggtttcggtcacagagcggactcgtgaaattggcatccgcatggcagta
ggcgctcgatcgagtgacgtgcttcaacaatttttaattgaagcggttttagtctgttta
gtagggggaaccatcggtattctgctctctttctgtattgggtttgcggttgaatttttt
ttaccgacctggtcattgaccttttcttcaatcgctttattcatcgcctttttctgctct
actatgattggtattgtatttggttatctacctgctcgtcacgcctctcgtctcaatccc
atagatgccctggcacctgaataa
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