Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_2301
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Entry
HDEF_2301 CDS
T00911
Symbol
rsmC
Name
(GenBank) 16S RNA m2G1207 methylase
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hde03009
]
HDEF_2301 (rsmC)
Enzymes [BR:
hde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
HDEF_2301 (rsmC)
Ribosome biogenesis [BR:
hde03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HDEF_2301 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
MTS_N
Methyltransf_31
Methyltransf_25
Methyltransf_12
PrmA
Methyltransf_16
FmrO
Methyltransf_11
Methyltransf_23
Methyltransf_2
TehB
Motif
Other DBs
NCBI-ProteinID:
ACQ68839
UniProt:
C4K8X0
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All DBs
Position
2067747..2068757
Genome browser
AA seq
336 aa
AA seq
DB search
MSDLTPPSQILLRHTREFAERSVIFSGDLQDLLPAQFNAKQIRVHTQEYHHWRLLSPVLK
NDIQFGVLPSEDLVSKTDTVIFYWPKNKAQAQFQLEHLCSLFPSQTNIFIVGENRSGIGS
AKDLLAENVGLHKMDAARRCSLYYGCLKQKPVFNMESQWRRYQVKDVQIKTLPGVFSANQ
LDEGSQLLLSSFDIPLSGKVLDLACGAGVLGTILARQSPQIELTLSDVNAAALESSRANL
AVNHIKARVVPSDLYSDIPERFNLILSNLPFHKGLKTDIKMIEKCIEEAPGHLYKGGKLR
LVANAFLPYPKLLNRTFGHYEVLTQNARFKVYQATL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttaaccccgccgagtcaaatactattgcgccatactcgtgaatttgctgag
cgatctgtgattttttcgggtgatctacaagatctgcttcccgctcagttcaacgccaaa
caaatcagggttcatactcaagaatatcatcactggcgattattgagccctgtattaaaa
aatgatattcaatttggtgtattaccgtctgaagatcttgtctccaagacagatacggtc
attttttattggcctaaaaataaagcccaagcgcaatttcaattagaacatttatgttcc
ttgttccccagccaaaccaatatatttattgtcggtgagaatcgcagtggtataggcagt
gctaaagaccttttggctgaaaatgtcggtttgcataaaatggatgccgcgcgtcgttgc
agtctatattatggttgtttaaaacaaaaaccggttttcaatatggaaagccaatggcgc
cgatatcaggtgaaagatgtgcaaataaaaacgctcccaggcgtatttagtgccaatcaa
ttagatgaaggcagtcaattattgctgtcttcgtttgatattccgttgagcggtaaggtg
ctggatctggcctgtggtgcgggtgtattaggcacaattttggctcgtcaatctcctcaa
attgaactgacactcagcgatgtgaatgcggcggctcttgaatcgagcagggccaatttg
gctgtgaatcatatcaaggcaagggtggttcccagcgatctatattcagatattccagaa
cgatttaatctcattttatccaatcttccttttcataaaggcctaaaaacagacattaaa
atgatagaaaaatgtattgaggaagcccctggacatctttataaaggcggaaaattaagg
ctcgtcgccaatgcttttttaccttatcctaaattattgaatcgtacttttggtcattat
gaagtattgactcaaaacgctcgctttaaagtatatcaagccacgctttaa
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