Hyphomicrobium denitrificans 1NES1: HYPDE_25543
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Entry
HYPDE_25543 CDS
T02646
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hdt03012
]
HYPDE_25543
Translation factors [BR:
hdt03012
]
Eukaryotic type
Elongation factors
HYPDE_25543
Prokaryotic type
HYPDE_25543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_2
SelB-wing_3
GTP_EFTU_D2
bact_SelB_WH_2nd
MMR_HSR1
GTP_EFTU_D4
GTP_EFTU_D3
HflX_C
Motif
Other DBs
NCBI-ProteinID:
AGK56793
UniProt:
N0B1F6
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All DBs
Position
complement(599106..601172)
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AA seq
688 aa
AA seq
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MIIGTAGHIDHGKTALVKALTGVEGDRLKEEKARGITIDLGFAYLPTSQGLTLGFIDVPG
HERFVHTMVAGASGIDFAMLTVAADDGIKPQTLEHLSIIDLLGIARGIVVITKKDLTTAD
CLSKVAADIKALTVGTTLETADVVAVSAITGDGIDALRERLVDAAAKIGQHPADGRFRLA
VDRAFTLQGIGVVVTGTVLSGRIEVGNHVRLSPSGLIARVRSIHAQNQPAEFGKAGDRCA
LNLTGPEISKDAIHRGDVVLDPELHAPTDRIDAVLRILQREEKPISQWFPIRLHHGAAEI
GAHIALLGDKPIPPGATTDVQLVLDEPIAAAVPDRFVIRDVSGRRTIGGGKFIDLRPPAR
KRRTPERQAQRAAMTLDDATKAFSALLAAPPFAVDVSSFARDRALSEKSVEQIKDELAIV
TFGTDESAIAVSLKTWQTFATDLKNALGAFHADNPDRQGIGREQLRLMLQPRLSKPSFAV
ALQKAAESGDIALDGAFVRLSSHQARLSTADEATWQSIAPLLGGDERFRPPRVRDIAEVI
DHSEHDVRRLFKLAGRAGWVDEIAHDHFFLRGTVQEMLATAIDISRKSEAGFFTAADLRD
RLSNGRKVAIQILEFFDRHGVTLRKGDMRTLNKHRLDLFGALVHSSAQTSGGESSPVGRS
DFKSEWGSEPALGGFDSHSPPPVISRKR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcggcaccgccggacatatcgaccatggaaagacggcactcgtcaaagccctg
acgggagtcgaaggcgaccgcctcaaggaagagaaggcgcgcggaattacgatcgatctg
ggctttgcctacctgccgacgtcgcagggactaacgctcggcttcatcgatgttccgggc
catgagcgtttcgttcacacgatggtggctggggccagcggcatcgacttcgcaatgttg
acggtcgcagccgacgacggcatcaagcctcagacgctcgagcatctttcgatcatcgat
ctcctcgggatcgcccgcggtatcgttgtcattaccaaaaaagacctgacgacagccgat
tgcctttcgaaggtcgcggccgacatcaaagcgctgaccgttgggaccactctcgagaca
gcagatgtggtggccgtttcagccataacgggcgacggaatcgatgcgcttcgcgaacgc
ctcgtcgacgctgctgccaagatcggacagcacccggccgacggacgctttcggcttgct
gtcgaccgggccttcacgctccaaggcatcggcgttgtcgtcacgggcaccgtgctttcg
ggcaggatcgaggtcggtaatcatgtccgcctgagcccatcgggattgatcgcgcgtgtg
cgctccatacacgcacagaaccaaccggcagagtttgggaaagctggcgacaggtgtgcg
ctgaatcttaccggccccgaaatctcgaaagacgcgatccaccgcggcgatgtcgtgctc
gatcccgagctgcatgcgccgaccgatcgcatcgatgcagtgctgcgcattctgcagcga
gaggagaagccgatcagtcagtggtttcctatccgcctccatcacggagcggcggagatc
ggtgcgcatatcgcgttgctcggcgacaagcccattccgccgggcgccacgacggatgtc
cagcttgtgctcgacgagccgattgctgccgccgtacctgatcgctttgttattcgcgac
gtgtcgggtcggcggacgatcggcggcggcaagttcatagatcttcgtcctccagcgcga
aaaaggcgaacgccggaacggcaagcccaacgtgctgcaatgacgctcgatgacgcgaca
aaagccttttcggcactactggccgcgccgccttttgcagtcgatgtctcaagcttcgcg
cgagatcgggcgctgtccgagaaaagcgttgagcagatcaaggatgagctcgcgatcgta
acgttcgggacggatgagtccgcgattgcggtgtcgctcaagacttggcagacctttgca
acggatctgaaaaacgcgctcggcgcgtttcacgccgacaatccagaccggcaaggcatc
gggcgcgagcagcttcgtttaatgctgcagcctcggctctcgaaaccgagttttgctgtc
gccctccagaaagccgctgaaagcggcgacattgccctcgatggtgcattcgtcaggctg
tcgtcgcatcaggctaggctcagcacagcggacgaagcgacatggcagtcgattgcgccg
ctgctcggaggtgacgagcgcttccggccgcctcgcgtccgcgatattgccgaggtaatt
gatcacagcgaacacgacgtccggcggctgttcaagctcgcaggacgcgccggctgggtg
gatgaaattgcgcacgatcatttctttttgcgcgggacggttcaggaaatgctggcgacg
gccatcgacatcagtcgcaaatcagaggcgggtttcttcaccgccgccgacctacgcgat
cgtctctccaatggacgtaaggtcgcgatccagattctggaattcttcgaccggcacggc
gtcacgcttcgcaaaggagacatgcgcacgctaaataagcatcgtctggacttgttcggc
gccctcgtgcattcgtcggcgcagacgtcaggaggtgaatcgtccccggtggggcgttcg
gacttcaaatccgagtggggcagcgagcctgccctaggtgggttcgactcccattctcct
ccgccagtcatttcaagaaagcgatga
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