Hyphomicrobium denitrificans 1NES1: HYPDE_28968
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Entry
HYPDE_28968 CDS
T02646
Symbol
rpsB
Name
(GenBank) 30S ribosomal protein S2/unknown domain fusion protein
KO
K02967
small subunit ribosomal protein S2
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Pathway
hdt03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HYPDE_28968 (rpsB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hdt03011
]
HYPDE_28968 (rpsB)
Ribosome [BR:
hdt03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HYPDE_28968 (rpsB)
Bacteria
HYPDE_28968 (rpsB)
Archaea
HYPDE_28968 (rpsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGK57472
UniProt:
N0B5J7
LinkDB
All DBs
Position
1259635..1260624
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AA seq
329 aa
AA seq
DB search
MALPAFNMRQLLEAGVHFGHQAHRWNPKMAPFIYGSRNKIHILDLTQTVPMLHQALLKVS
DTVAGGGRVLFVATKRQASDGIAEAAKRSAQYFINHRWLGGTLTNWKTVSQSIRRLRQLD
DILADPQGRTKKEILNLTRERDKLNQSLGGIKDMGGTPDLLVVIDTNKESIAIQEARKLN
IPIVAIVDTNCDPDGIDYPVPGNDDAGRAITLYCDLMARAALDGIERAQGAAGVDIGASD
APPAEDLPKVTFKGIEAPRGEADDLKRITGITPKLEQRLNDAGVYHFWQIADLDADHTAA
LDRQLKLKGQVVKEDWVGQAKKLVEAASV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcctgccttcaatatgcgtcagcttttggaagctggcgttcacttcggccac
caggctcaccgctggaaccccaagatggcaccgttcatctatgggtcgcggaacaaaatc
cacattctcgatctgacgcagacggtgccgatgctgcatcaggcgctgctcaaggtttcc
gatacggtggccggcggcggtcgcgttcttttcgttgcaacgaagcggcaggcgtctgac
ggcatcgcggaagccgcgaagcgcagtgcgcagtacttcatcaatcaccgctggctaggt
ggtacgctgacgaactggaaaacggtctcgcagtccatccgacgcctgcgtcagctcgac
gatattcttgccgatccgcagggtcgcacgaagaaagaaattctgaacctgacgcgcgag
cgcgacaagctcaatcagtcgctcggcggcatcaaggacatgggcggcacgcccgacctt
ctcgtcgtcatcgacacgaacaaggaatcgatcgcgatccaggaagcgcgcaagctgaac
attccgatcgtggcgatcgtcgatacgaactgcgatccggacggcattgattatccggtg
ccgggcaatgacgatgccggccgcgcgatcacgctctattgcgatctgatggcacgtgct
gcgctcgacggcatcgagcgtgcacagggtgctgccggtgtcgatatcggtgcttcggac
gcgcctcctgctgaggatctgccgaaggtcacgttcaagggcatcgaggctccgcgtggc
gaagcggatgatttgaagcgcatcactggtatcacgccgaagctcgaacagcgtctcaac
gacgccggcgtctaccacttctggcagatcgctgatctcgacgccgaccatacggctgct
ctcgaccggcagctgaagctcaagggccaggtcgtcaaagaagattgggttggccaggct
aagaagctcgtggaagcagcctcggtataa
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