Herbaspirillum sp. meg3: hmeg3_00730
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Entry
hmeg3_00730 CDS
T05024
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00550
Peptidoglycan biosynthesis
hee01100
Metabolic pathways
hee01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
hmeg3_00730 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
hmeg3_00730 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hee01011
]
hmeg3_00730 (mrdA)
Enzymes [BR:
hee01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
hmeg3_00730 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hee01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
hmeg3_00730 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
Motif
Other DBs
NCBI-ProteinID:
ASU36958
UniProt:
A0A223P548
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All DBs
Position
156766..158703
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AA seq
645 aa
AA seq
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MTEFKNTEHELKLFRLRLFAVAVLVLVCFGLLTARFIWLQIVRHDAYAAQAEENRISVVP
IVPNRGLILDRNGVVLARNYSAYTLEITPSKITMGLDELVDELSTLVDIQPKDRRRFRKL
QEESKNFESLPIRTRLTDEEVAKFTAQRYRFPGVDIQARLFRQYPYGKTAAHVIGYIGRI
SQRDADRIADSDDEANYNGTDYIGKEGLEKSYETQLHGTTGYEEVEISAGGRAVRTLSRT
PASPGQNLILSIDIELQKVIEEAFGDRKGALVAIDPATGDILAYVSQPSFDPNVFVEGID
QQTWDELNNSPDRPLINRPLSGTYPPGSTYKPFMALAALELGKRKPTDSIRDPGFFWLGN
HKFRDDKEGGHGVVDMYRSIVVSCDTYYYMLANDLGVDAIHDFMKPFGFGQITGIDLEHE
RKGLLPSTTWKSNAYRKPEQRKWYAGETISLGIGQGYNAFTPIQMAHATATLANNGIVMK
PHLVKMIEDGVTHERTVTVPKESYRIPLKQENIDVIKQAMVGVNKEGTGARVFAGAEYTS
AGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVIVENGGWGAEAA
APLARKAIDFYLLGKRPGDKAKAAAKDSEVATPPATDAVGNDLRD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattcaaaaacaccgagcatgaactcaagctcttccggctgcggctattcgcc
gtggcggtgctcgtgctcgtgtgttttggtctgctgaccgcgcgcttcatctggctccag
atcgttcgtcacgatgcttatgcagcgcaggcggaagaaaatcgtatctcggtggtgcct
atcgtgccaaaccggggcctgattctggaccgcaatggcgtcgtgctggcgcgcaactat
tctgcctataccctggaaatcacgccgtccaagatcaccatgggccttgatgaactggtc
gacgaactcagtacgctggtcgatatccagccgaaggataggcgccgcttccgcaagctg
caggaagaatccaagaactttgaaagcctgccgatccgcacgcgcctgaccgatgaagaa
gtcgccaaatttaccgcgcagcgctatcgtttccccggcgttgatattcaggcgcgtctg
ttccgccaatatccctacgggaagacggcggcgcacgtgatcggctacatcggccgcatc
agccagcgcgatgccgaccgcattgcggattccgacgacgaagccaattacaacggcacc
gactacatcggcaaggaaggtctggaaaagagctatgagactcagcttcacggcaccacc
ggttacgaagaagtggaaatttccgccggtggccgcgccgtgcgtacgctgtcgcgcacg
cctgccagcccgggtcagaacctgattctgtcaatcgatatcgagctgcaaaaagtcatc
gaagaagctttcggtgatcgcaagggcgctctggtggcaatcgatcccgctaccggcgac
attctggcctatgtctcgcaaccatccttcgaccccaatgtctttgttgaaggcatcgat
cagcaaacctgggatgagttgaacaactcacccgatcgccccctgatcaaccgtcctttg
tccggtacctatccgccaggttcgacctataagcctttcatggcgctggccgcgctggag
ctgggcaagcgcaagccgaccgactccatccgcgatcccggcttcttctggctcggcaac
cacaagttccgcgacgataaggaaggtggtcacggcgtggtcgacatgtaccgctcgatc
gtcgtgtcttgcgatacctactactacatgctggccaacgatctcggcgtcgacgccatt
catgatttcatgaagccgttcggtttcggccagatcaccggtatcgatctggagcacgag
cgcaagggcctgctgccgtcgaccacatggaagagcaatgcttatcgcaagccggagcag
cgcaagtggtatgccggtgaaaccatttcgctgggcatcggccagggttacaacgcgttc
acaccgattcagatggcccacgccacggcgacgctggccaataacggtattgtcatgaag
ccgcatctggtcaaaatgatcgaagatggcgtcacgcatgagcgcactgtgaccgtaccg
aaggaaagctatcgcattccgctcaagcaggaaaacatcgatgtcatcaaacaagccatg
gtcggcgtgaataaagaaggtaccggtgcgcgcgtatttgccggcgcggaatacacgtcg
gccggcaagagcggcaccgcacaggtggtgtcgatcaagaagaacgagaagtacgacgcc
aagcgcctggcaacgcatctgttggataatgcgttgttcacggcgtttgcaccggccgac
aagccgcgtatcgccttgtcggtcatcgtcgaaaacggcggctggggtgcggaagccgcg
gcgccgctggcacgcaaggcgattgacttctatctgctcggcaagcgtcccggcgacaag
gccaaggccgccgccaaggatagcgaagtcgccaccccacctgcaacagacgcggtcggc
aacgatctcagggactag
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