Herbaspirillum sp. meg3: hmeg3_22450
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Entry
hmeg3_22450 CDS
T05024
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee00300
Lysine biosynthesis
hee00470
D-Amino acid metabolism
hee01100
Metabolic pathways
hee01110
Biosynthesis of secondary metabolites
hee01120
Microbial metabolism in diverse environments
hee01230
Biosynthesis of amino acids
Module
hee_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
hmeg3_22450 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
hmeg3_22450 (lysA)
Enzymes [BR:
hee01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
hmeg3_22450 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FAM47
Motif
Other DBs
NCBI-ProteinID:
ASU40787
UniProt:
A0A223PFE1
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Position
complement(4995850..4997145)
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AA seq
431 aa
AA seq
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MPHFSYRDGVLHAENLPLNALAKQFGSPLYVYSKAALTANYSAYADACKKAGRSVDAGEG
GALVCYSVKSNSNLAVLNLLGKLGSGFDIVSGGELLRVIAAGGDPRKVIFSGVGKGRDEM
RLALEHDILCFNVESIPEVHRLNEVAGEAGKRARISLRVNPNVDAKTHPYISTGLKENKF
GVAYEDALACYRDAAALPNIEVVGIDCHIGSQLLDDAPLLEALDKVIELIDQLESEGIAI
HHLDIGGGIGITYDDEQPVPVGDYLGRLFARVDTWRKQKYDGRAIKVMFEPGRSIVGNAG
LLITEVQYLKHGETKNFAVVDAAMNDLMRPALYEAWHGVQAVQQRKDAAQTYDIVGPVCE
SGDWLARNRELALESGDLLALMSAGAYGMTMASNYNTRGRAAEVLVDGDKVHLIRKRENP
ADLFALEAIVD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgccccatttttcctatcgcgacggcgttctgcacgctgaaaatctgcccttgaatgca
ctggccaagcaattcggctcgccgctctacgtgtattccaaggcagcattgaccgccaac
tactccgcctacgccgatgcctgcaaaaaagccggccgcagcgtggatgccggtgagggc
ggcgcgctggtgtgttattcggtcaaatccaattccaatctggcagtgttgaacctgctg
ggcaaactcggttccggcttcgacatcgtttcgggcggcgaactgctgcgtgtgatcgcc
gccggcggcgatccgcgcaaggtgatcttttccggcgtgggcaagggccgtgacgaaatg
cgtctggcgctggagcacgacatcctctgcttcaatgtcgaatcgatccccgaagtccat
cgcctcaatgaagtcgcaggcgaagccggcaagcgtgcgcgcatctcgctgcgcgtcaat
cccaacgtcgacgccaagacccatccctacatttccaccggcctgaaagaaaacaagttc
ggcgtcgcctatgaagacgcattggcctgctaccgcgatgcggctgcactgccgaacatt
gaagtcgtcggcattgactgccacatcggttcgcagttgctggacgacgcgccgctgctg
gaagcgctcgacaaagtcattgaactgatcgatcagctggaatccgaaggtatcgccatc
catcacctcgacatcggtggcggcatcggcatcacttatgacgacgagcaaccggttccg
gtcggcgactacctgggccggctgtttgcccgcgtcgacacctggcgcaagcaaaagtac
gacggccgtgccatcaaggtcatgttcgaacccggccgttccatcgtcggcaacgcgggt
ctgctgatcaccgaagtgcaatacctgaagcacggtgaaaccaaaaacttcgccgtggtc
gacgccgccatgaacgacctcatgcgtcccgccttgtatgaagcctggcatggcgtgcaa
gccgtgcagcaacgcaaggatgcggcacaaacctacgacatcgtcggccccgtctgcgaa
tccggtgactggctggcgcgcaaccgcgaactggcattggagtccggggacctgctggcg
ttgatgtcggccggtgcttacggcatgaccatggcctccaactacaacactcgcggccgt
gcggcagaagtgctggtcgatggcgacaaggtgcacctgatccgcaagcgcgaaaatccg
gctgacctgtttgcgctggaagctatcgtcgactga
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