KEGG   Herbaspirillum sp. meg3: hmeg3_22450
Entry
hmeg3_22450       CDS       T05024                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
hee  Herbaspirillum sp. meg3
Pathway
hee00300  Lysine biosynthesis
hee00470  D-Amino acid metabolism
hee01100  Metabolic pathways
hee01110  Biosynthesis of secondary metabolites
hee01120  Microbial metabolism in diverse environments
hee01230  Biosynthesis of amino acids
Module
hee_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hee00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    hmeg3_22450 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    hmeg3_22450 (lysA)
Enzymes [BR:hee01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     hmeg3_22450 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N FAM47
Other DBs
NCBI-ProteinID: ASU40787
UniProt: A0A223PFE1
LinkDB
Position
complement(4995850..4997145)
AA seq 431 aa
MPHFSYRDGVLHAENLPLNALAKQFGSPLYVYSKAALTANYSAYADACKKAGRSVDAGEG
GALVCYSVKSNSNLAVLNLLGKLGSGFDIVSGGELLRVIAAGGDPRKVIFSGVGKGRDEM
RLALEHDILCFNVESIPEVHRLNEVAGEAGKRARISLRVNPNVDAKTHPYISTGLKENKF
GVAYEDALACYRDAAALPNIEVVGIDCHIGSQLLDDAPLLEALDKVIELIDQLESEGIAI
HHLDIGGGIGITYDDEQPVPVGDYLGRLFARVDTWRKQKYDGRAIKVMFEPGRSIVGNAG
LLITEVQYLKHGETKNFAVVDAAMNDLMRPALYEAWHGVQAVQQRKDAAQTYDIVGPVCE
SGDWLARNRELALESGDLLALMSAGAYGMTMASNYNTRGRAAEVLVDGDKVHLIRKRENP
ADLFALEAIVD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgccccatttttcctatcgcgacggcgttctgcacgctgaaaatctgcccttgaatgca
ctggccaagcaattcggctcgccgctctacgtgtattccaaggcagcattgaccgccaac
tactccgcctacgccgatgcctgcaaaaaagccggccgcagcgtggatgccggtgagggc
ggcgcgctggtgtgttattcggtcaaatccaattccaatctggcagtgttgaacctgctg
ggcaaactcggttccggcttcgacatcgtttcgggcggcgaactgctgcgtgtgatcgcc
gccggcggcgatccgcgcaaggtgatcttttccggcgtgggcaagggccgtgacgaaatg
cgtctggcgctggagcacgacatcctctgcttcaatgtcgaatcgatccccgaagtccat
cgcctcaatgaagtcgcaggcgaagccggcaagcgtgcgcgcatctcgctgcgcgtcaat
cccaacgtcgacgccaagacccatccctacatttccaccggcctgaaagaaaacaagttc
ggcgtcgcctatgaagacgcattggcctgctaccgcgatgcggctgcactgccgaacatt
gaagtcgtcggcattgactgccacatcggttcgcagttgctggacgacgcgccgctgctg
gaagcgctcgacaaagtcattgaactgatcgatcagctggaatccgaaggtatcgccatc
catcacctcgacatcggtggcggcatcggcatcacttatgacgacgagcaaccggttccg
gtcggcgactacctgggccggctgtttgcccgcgtcgacacctggcgcaagcaaaagtac
gacggccgtgccatcaaggtcatgttcgaacccggccgttccatcgtcggcaacgcgggt
ctgctgatcaccgaagtgcaatacctgaagcacggtgaaaccaaaaacttcgccgtggtc
gacgccgccatgaacgacctcatgcgtcccgccttgtatgaagcctggcatggcgtgcaa
gccgtgcagcaacgcaaggatgcggcacaaacctacgacatcgtcggccccgtctgcgaa
tccggtgactggctggcgcgcaaccgcgaactggcattggagtccggggacctgctggcg
ttgatgtcggccggtgcttacggcatgaccatggcctccaactacaacactcgcggccgt
gcggcagaagtgctggtcgatggcgacaaggtgcacctgatccgcaagcgcgaaaatccg
gctgacctgtttgcgctggaagctatcgtcgactga

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