Helicobacter pylori Gambia94/24: HPGAM_06090
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Entry
HPGAM_06090 CDS
T01917
Name
(GenBank) Outer membrane protein HopQ; putative signal peptide
Organism
heg
Helicobacter pylori Gambia94/24
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
23S_rRNA_IVP
SapB_1
Motif
Other DBs
NCBI-ProteinID:
ADU82001
LinkDB
All DBs
Position
complement(1237098..1239002)
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AA seq
634 aa
AA seq
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MKKTKKTILLSLTLAASLLHAEDNGVFLSVGYQIGEAVQKVKNADKIQKLSDAYENLNKL
LAHHGHSNPEAINASSATAINQAINNLNKSAQTLVDKTDNSPAYQATLLALQSTVGLWNS
IAYAVICGGYTDKPNHNITETFYNQPGQGSNSITCGSNGLGTLKAGKNSHLSIEQFATLN
KAYQIIQAALKQGLPALSNTKKTVEVTIKTGTNAQNINVNNNNNNAADTTVSITDTFIND
AQNLLTQAQTIINTLQDNCPMLKGKSSSSNGGTNNANTPSWQTSANQNSCSVFGTEFSAI
SSMISNAQNIVQETQQLNANQPKNITQPNNFNLNSPNSVALAQSMLKNAQSQTEILKLAN
QVGSDFNRISTGVLKNYIEGCSANASSESVSNTTWGKGCAGVKSTLESLESSNASFSSQT
PQINQAQTLANAIVQELGHNPFKRVGIIGSQTNNGAMNGLGVQAGYKQFFGEKRRWGLRY
YGFFDYNHTYIKSSFFNSASDIWTYGVGSDLLFNFINDKNTNFLGKNNKLSVGLFGGIAL
AGTSWLNSQFVNLKTISNVYSAKVNTANFQFLFNLGLRTNLARPKKKDSDHSAQHGMELG
VKIPTINTNYYSFLDTKLEYRRLYSVYLNYVFAY
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacgaaaaaaacgattttactttctctaactcttgcggcgtcattgctccat
gctgaagacaacggcgtttttttaagcgtgggctatcaaatcggtgaagcggttcaaaag
gtgaaaaacgccgacaagatccaaaagctttcagacgcttatgaaaacttgaacaagctt
ttagctcatcatggccactccaatccagaagcgattaacgcaagcagcgcaacagcaatc
aaccaagcgatcaataatttaaacaaaagcgcgcaaactttagttgataaaacagacaat
tcccctgcctatcaagccacgcttttagcgctccaatccacggtggggttatggaatagt
atagcctatgcggtcatatgtggaggctatacggataaacccaatcacaacatcacagaa
actttttacaaccaaccaggacaaggttcaaattcgatcacttgcggtagcaatggctta
gggactcttaaagcaggcaaaaattctcatctgtccattgaacaatttgcaacgctcaat
aaagcgtatcaaatcatccaagccgctttgaaacaaggtctccctgctttaagcaatacg
aaaaaaacggtggaagtaaccattaaaacgggaaccaacgctcaaaacatcaatgtcaat
aataacaataacaatgctgctgacactacagttagcataactgatacttttattaacgat
gcgcaaaatcttttaacccaagcgcaaacaatcatcaacacccttcaagacaattgcccg
atgctgaaagggaagtcttctagtagtaatggtggaactaataacgcaaacaccccttcg
tggcaaacaagcgctaaccaaaattcgtgtagcgtttttggcacggaatttagcgctatt
tcaagcatgatcagtaacgctcaaaacatcgttcaagaaacccaacaacttaacgccaac
caacccaaaaatatcacccaacccaataatttcaaccttaattctcctaatagtgtcgct
ttggctcaaagcatgctcaaaaacgctcaatctcaaacagaaattttaaaactggccaat
caagtggggagcgatttcaatagaatttctacaggagttcttaaaaactatatagaagga
tgcagcgcgaatgcttcaagtgagagcgtttctaataccacttgggggaaaggctgtgcg
ggcgtgaaaagcactctagaatcgctagaaagcagcaacgcttctttttctagccaaacg
cctcaaatcaatcaagcgcaaaccctagccaacgccattgttcaagaactcggtcataac
cctttcaaacgagtgggtatcattggctctcaaaccaataacggggcgatgaatggcctt
ggggtgcaagcgggttataagcaattttttggagaaaagagaagatgggggttaaggtat
tacggcttttttgactacaaccatacctatatcaaatccagcttttttaactcggcttct
gacatttggacttatggggtgggcagcgatttattgtttaatttcatcaatgataaaaac
accaatttcttaggcaagaataataagctttctgtggggctttttggtggcatcgcgcta
gcagggacttcgtggcttaattctcaattcgtgaatttaaaaaccatcagcaatgtttat
agcgctaaagtgaatacggctaatttccaattcttattcaatttaggcttaagaaccaat
ctcgctaggcctaagaaaaaagacagcgatcattccgcgcaacatggcatggaattgggc
gtgaagatccctaccattaacacgaattattattcttttctagacactaaactagaatat
aggaggctttatagcgtgtatctcaattatgtgtttgcttattga
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