Halomonas elongata: HELO_1277
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Entry
HELO_1277 CDS
T01311
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hel
Halomonas elongata
Brite
KEGG Orthology (KO) [BR:
hel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hel03021
]
HELO_1277 (rapA)
Transcription machinery [BR:
hel03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HELO_1277 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Nitro_FeMo-Co
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
CBV41160
UniProt:
E1V5P8
LinkDB
All DBs
Position
complement(313887..316820)
Genome browser
AA seq
977 aa
AA seq
DB search
MSDFSPGQRWISDGEAELGLGTILNCDNRSVTVLFGASQETRTYSSRQAPLTRVVFGSGD
RIQSTDGWHLIVDDSKEANGLITYIGENEQGELCELPEAKLADTMQFDQARDRLLTGQVD
RNDWFDLRFRTLHHHHRVEQNPALGLAGPRVDLIPHQLYIADEVARRPSPRVLLADEVGL
GKTIEAGLILHRLLLTGRAERALILVPASLTHQWLVELLRRFSLEVTLLDEQQSLAHGDA
NPFEAGQLILASQDWLFADPHRQAQAEACDWDLLIVDEAHHLEWSEERVGPGYACVERLA
GSVPGILLLTATPEQMGQESHFTRLRLLDPDRYHSLADFQEEERHYIEVAEAIDALERLP
GQEEDRQRVAAVIHEADSQALLDTLASSESDAAQRDAARDQLRDQLLDRHGTGRVMFRNS
RRHVGGFPERRLHVDHLEPPAAYRRVLRRLSRDEDYLDELLIESGLDHPEVLVYLDTMYR
ALANDPLNAEPWWQIDPRVTWLLERLTELGDDKVLVIAHDRETAIGLSEGLRVLGGMHAP
VFHEGLSLVERDRAAAAFADEEEGCQVLVCSEIGSEGRNFQFCHHLVMFDLPLHPDQLEQ
RIGRLDRIGQRHPIEMHVPVFTDSPGERLLRWYRDGMDAFSAPHGLGSDIYAAFGDALAD
ALLDEEALEEVIDETRSFFESRLAERDAGRNRLLELNACRHERAEAVISSIHELDTDRAL
RRYIDQALDIFGVDSQDLGGDIQLLQPSPQMLDGLPGLVKGEEGFSATFSRERALARDDV
QHLSWEHPLTREMMARILEGSMGNTALALLKHPSIPGGRLMAELVFRTHCPAPKRLHLNR
FLPPTAVRVLLDESGANLTDKISFSGLSKNLNKVKKAVARDLIKSRHDQLRELLDRAETE
AERELPSIVEAAQDRMRTALDAELARLEALARRNPSVREDELTALRDERATLDAAIEGTR
LRLDAVRVIVTVDEDSR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttctctcccggccaacgctggatcagcgacggcgaggccgaacttggcctt
ggcaccattctcaactgcgacaaccgcagcgtcaccgtcctcttcggcgccagccaggaa
acccgcacctacagcagccggcaggcccccctgacccgagtggtctttggcagcggcgat
cgcatccagtccaccgacggctggcacctgatcgtcgacgacagcaaggaagccaatggc
ctgatcacctacatcggcgaaaacgagcagggcgaactctgcgaactgcccgaggccaag
ctcgccgacaccatgcaattcgaccaggccagggatcgcctgctgaccggccaggtcgat
cgcaacgactggttcgacctgcgtttcaggaccctgcaccatcatcaccgcgtcgagcag
aaccccgccctgggcctggccggcccacgcgtcgacctgattccccatcagctctacatc
gccgatgaggtcgcccgccggccgtcaccgcgcgtgctgctggccgacgaagtgggcctg
ggcaagaccatcgaggccggcctgatcctgcaccggctgctgctcaccggccgcgccgag
cgcgccttgatcctggtaccggccagcctgacccaccagtggctggtggaattgctgcgc
cgcttctcgctggaagtcaccctgctggacgaacagcagagcctggcccacggcgatgcc
aaccccttcgaggccggccagcttatcctggccagccaggactggttgttcgccgatccg
caccgccaggcccaggccgaagcctgcgactgggacctgctaatcgtcgacgaagcccac
cacctggaatggtccgaagaacgtgtcggccccggttacgcctgtgtggaacgcctcgcc
ggcagcgtacccggcattctgctgctcaccgccacgccagagcagatgggccaggagagc
cacttcacgcggctgcggctgctcgacccggaccgctaccacagcctggctgacttccag
gaagaggagcgccactacatcgaggtcgccgaggccatcgatgccctggagcgcctgccc
ggccaggaggaagatcgtcaacgcgtcgcggcggtgattcacgaggccgacagccaggcc
ctgctggacaccctggcctcgtcggaaagcgacgcggcacagcgcgacgccgcccgcgac
caactgcgcgatcagttgctggatcgccatggcaccggccgggtgatgttccgcaacagt
cggcgccacgtcggcggcttccccgaacgccgcctgcatgtcgatcacctcgagccgccc
gccgcctaccggcgcgtgctgcgtcgcctgagtcgcgacgaggattacctggacgaactg
ctcatcgagagcggcctcgaccaccccgaggtgctggtctatctggacaccatgtaccgg
gcactggccaacgatcccctgaatgccgaaccctggtggcagatcgacccgcgggtgacc
tggctgctcgagcgcctgaccgagctgggcgacgacaaggtgctggtgatcgcccatgac
cgcgagaccgccatcggcctgtccgaaggactccgtgtgctgggcggcatgcatgctccg
gtattccacgaagggctctcgctggtggaacgcgaccgggcggcggccgccttcgccgac
gaagaggaaggctgccaggttctggtgtgctcggagatcggttccgagggccgcaacttc
cagttctgccatcacctggtgatgttcgacctgccgctgcatcccgatcagctggaacag
cgcatcggccgcctcgaccggatcggccagcgccaccccatcgaaatgcatgtcccggta
ttcacggacagccccggcgagcggctgctgcgctggtaccgcgacggcatggacgccttc
agcgcgccgcatggcctaggcagcgatatctatgccgccttcggcgacgccctggccgat
gccctgctcgacgaagaagcgctggaagaagtcatcgacgagacccgcagcttcttcgag
tcccgactggccgagcgcgatgccggccgcaaccggttgctggagctcaacgcctgccgc
cacgagcgcgccgaggccgtcatctcgtcgatccacgaactggacaccgaccgtgccctg
cgccgctacatcgaccaggctctggacatcttcggcgtcgacagccaggacctgggcggc
gacatccagcttctgcaacccagcccgcagatgctcgatggcctgcccggcctggtaaaa
ggcgaggaaggcttctcggcgaccttctcccgggagcgcgccctggcccgtgacgacgtc
cagcacctcagttgggagcacccgctgacccgcgagatgatggcccgcatcctcgaaggc
tccatgggcaacaccgccctggcactgctcaagcatccgtcgattcccggcggacgcctg
atggccgaactggtcttccgcacccattgtccggcgcccaagcggctgcacctcaaccgc
ttcctgccacccactgcggttcgcgtgctgctcgacgaatccggcgccaacctcaccgac
aagatctccttcagcggcctgtcgaagaacctgaacaaggtcaagaaggcggtggctcgc
gacctgatcaagagccgccacgaccagctccgcgagctgctcgaccgcgccgagacggag
gccgagcgcgaactgccgagcatcgtcgaagccgcccaggaccgcatgcgcaccgccctc
gacgccgaactggcacgcctggaggccctggcacggcgcaatccctcggtgcgcgaggac
gaactgaccgccctgcgcgacgagcgcgcgaccctggatgccgccatcgaaggtacccgg
ctacgcctcgacgccgtgcgcgtcatcgtcaccgtggacgaggactctcgctag
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