Helicobacter pylori SNT49: HPSNT_07325
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Entry
HPSNT_07325 CDS
T01916
Name
(GenBank) DNA helicase II (uvrD)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hen
Helicobacter pylori SNT49
Pathway
hen03420
Nucleotide excision repair
hen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPSNT_07325
03430 Mismatch repair
HPSNT_07325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hen03400
]
HPSNT_07325
Enzymes [BR:
hen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPSNT_07325
DNA repair and recombination proteins [BR:
hen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPSNT_07325
MMR (mismatch excision repair)
Other MMR factors
HPSNT_07325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AEN17586
UniProt:
G2MFP0
LinkDB
All DBs
Position
complement(1476131..1478176)
Genome browser
AA seq
681 aa
AA seq
DB search
MDFEKSILGNLNGAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASREMQERALKLLNNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDE
VKTLCKQLKISNFRASISQIKNGMMDLSMQDSECYKAYELYQNALQKDNLVDFDDLLLLS
LKILQDNETIAKETSERYYYIMVDEYQDTNALQLEFLKQLSCAHHNLCVVGDDDQSIYGF
RGADVSNILNFSKHFKGAKIVKLETNYRSSAEILACANALISHNQHRHIKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGALSFYERAEVKDALAFMYLVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDDEDLN
LEEALKLGVFKDKLNPKNEHALKQFIAMIERLREAFEISVEEFCARFLEETNLLKSYEKE
DNYEEREGFVKELLTLLKEHFKTNPTHSLLDFLNESVLDTHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVQERSYFGRKIS
CSPSVFLEEAKLLQQDNPPKQDYQKDTPIKVGDLIRHKIFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISEKFVEKVDNGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagcattttaggcaatttaaacggagcgcaaaaaatcgctgcaagc
cacattcaagggcctttgctgattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagtagagaaatgcaagaaagggctttgaaattgttgaac
aatcaagcccttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgaatcttttaaaaagagcgtgcgatttttcggtattagatagcgatgaa
gtcaaaacgctgtgcaaacagctcaaaatttcaaacttcagggcgagcatttctcaaatc
aaaaacggcatgatggatttgagcatgcaagatagcgaatgttataaagcgtatgagctt
tatcaaaacgcgcttcaaaaagacaatttagtggattttgacgatttgcttttgttaagc
cttaagattttacaagataatgaaaccatcgccaaagagactagcgagcgctattattac
attatggtagatgagtatcaagacacgaacgccctgcaattggagtttttaaaacaattg
agttgcgcgcatcataatttgtgcgtggtgggcgatgacgatcagagcatttatggtttt
aggggggctgatgtttctaacattttaaatttttccaagcattttaaaggggctaaaata
gtgaaattagagaccaactaccgctccagcgctgaaattttagcgtgcgctaacgccctt
attagccataaccaacaccggcatattaaaacgcttcaaagttttaaaggatcgcataaa
agcgtggtttgtaaagaatatttgacgcaaaaagaagagagcctggatgtggcttatcag
atcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtaccgctta
aacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccctataggctt
attggggcgctgagtttttatgaaagagcagaggttaaagacgctttggcgttcatgtat
ttagtggcgaaaaaagacgatcgcttttttatcaagcgcgttttaaacaagcccccaaga
ggccttggcaagatcactcaagaatggattttttctcttttagatgatgaagatttgaat
ttagaagaagcgctaaaacttggggtgtttaaagacaaattaaaccctaaaaatgaacac
gctttgaaacaatttatcgctatgatagagcgtttgagggaggcttttgaaatttcagta
gaggagttttgtgctcggtttttagaagaaaccaaccttttaaaaagctatgaaaaagaa
gacaattatgaagaaagagagggctttgttaaagagcttttaaccctattgaaagagcat
tttaaaactaaccccacgcattctttactggattttttgaatgaaagcgttttggatacc
cataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaagggatta
gagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcatagggggttc
aatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagggct
aaagaaggattgcagctctcttatgttcaagagcgttcgtattttgggaggaaaatttct
tgctcgccttctgtgtttttagaagaagccaagttactccaacaagacaacccccctaaa
caggattatcaaaaagatacgcccattaaagtgggggatttgattaggcataagattttt
ggcaccgggagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataacggg
ttttga
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