KEGG   Heterocephalus glaber (naked mole rat): 101715248Help
Entry
101715248         CDS       T02812                                 

Gene name
Setdb1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
hgl  Heterocephalus glaber (naked mole rat)
Pathway
hgl00310  Lysine degradation
hgl04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:hgl00001]
 Metabolism
  Amino acid metabolism
   00310 Lysine degradation
    101715248 (Setdb1)
 Cellular Processes
  Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    101715248 (Setdb1)
Enzymes [BR:hgl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     101715248 (Setdb1)
Chromosome [BR:hgl03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     101715248 (Setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101715248 (Setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD DUF4537
Motif
Other DBs
NCBI-GeneID: 101715248
NCBI-ProteinID: XP_004854106
LinkDB All DBs
Position
Un
AA seq 1293 aa AA seqDB search
MSSLPGCIGFDAATAAGESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSNLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSCQDL
HKGSFSHMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGSGKKYKVKFDNKGKS
LLSGNHIAYDYHPLADNLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPVCRPLQKTWEDIEDTSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPPAPSVPPAPPLSPQAGDNESLES
QLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQTFRSLLGSTASVPA
PAAPPGPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKN
PLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMF
CLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVF
INTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGV
YECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILT
DDFADKEGLEMGDEYFANLDHIESVENFKEGYESDIPCSSDSSGVDLKDQEDGNSGTEDP
EESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMASKDARPPDLGPPHIP
LPPTIPAGVCNPPSSEETPKSKVASWLSCNSVSESGFADSDSRSSFKTAEGGEGRAAGGL
GEAEKTSASGLGIKDEEDSKQAKKEDPDDRNKTSVVPESSRNYGYNPSPVKPEGLRRPPS
KTSMHQSRRLLAAAQSNPDDVLTLSSSTESEGESGTSQKPTAGQTPATAVDSDDIQTISS
GSEGDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTR
QFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAG
TELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3882 nt NT seq  +upstreamnt  +downstreamnt
atgtcttccctacctgggtgcatcggtttcgatgcagcaacagctgcaggggagtctgaa
gagattgcagagctacaacaggcagtggttgaagagctgggtatttctatggaggaactt
cggcagttcatcgatgaagaactggaaaagatggattgtgtacaacagcgcaagaagcag
ttagcagagttggagacatgggtaatacagaaagaatctgaagtggctcatgttgaccag
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttctat
tccaacctgggactacagtaccgggacagtagctctgaggatgaagcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtgctcagtattgattcaggtgatgct
gggagcagaactcccaaagaccagaagctccgtgaagccatggctgccttaagaaaatca
gctcaagatgtccagaagttcatggatgccgtcaacaagaagagcagttgtcaggatttg
cataaaggaagcttcagtcacatgtctggagaactgagcaaagatggtgacctgatagtc
agcatgcggattctgggcaagaagagaactaagacctggcacaaagggaccctgattgcc
atccagacagtgggctcaggaaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctgctgtctgggaaccatattgcctatgattaccaccctcttgctgacaacctgtatgtg
ggcagtcgagtggtagccaaatacaaagatgggaatcaggtctggctttatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcagattcctcattttctttgatgatggc
tatgcttcctatgtcacacagtcagaactgtatcccgtttgccgaccactgcaaaagact
tgggaggacatagaagacacctcctgccgagacttcatagaggagtacatcacagcctat
cccaaccggcccatggtgctgctcaagagtggccagcttatcaagaccgagtgggaaggc
acctggtggaagtcccgagtggaggaggtggacggcagccttgtcaggatcctcttcttg
gatgacaaaagatgcgagtggatctatcgaggctctacccggctggagcccatgttcagc
atgaagacatcctcagcctctgcactggagaagaagcaagggggacaactcaggacacgt
ccaaatatgggtgctgtgagaagcaaaggtcctgttgtccagtacacccaggatctgacg
agcactggaacccagttcaagccagtggagcccccacaacctacagctccacctgctcca
tctgttccacctgctccacctttgtccccccaggcgggtgacaatgaaagtttagaaagc
cagcttgctcagtcacggaagcaggtagccaaaaagagcacatccttcagaccaggatct
gtgggctctggtcattcttcccctacatcccctgcactcagtgaaaatgcccctggtggg
aaacctgggatcaaccagacattcagatcacttttaggctcaacagcctctgtcccggcc
cctgctgcgcccccaggtcctccagcccctccagccttccatggcatgctggagcgagcc
ccagcagagccctcgtaccgagcccccatggagaagcttttctacttacctcatgtctgc
agctatacttgtctgtctcgggtcagacctatgaggagtgagcagtaccgaggcaagaat
cctctgttagtcccactactctatgacttccggcggatgactgcccggcgccgagttaac
cgcaaaatgggctttcatgtcatctataagacaccttgtggcctctgccttcggacaatg
caagagattgaacgctacctttttgaaactggatgtgacttcctcttcctggagatgttc
tgcttggatccatacgttctagtggaccgaaaatttcagccctacaagcctttttactat
attttggacatcacctatgggaaggaagatgttcccctgtcctgtgtcaatgagatcgac
acaacccccccaccccaggtggcctatagcaaggaacggatcccaggcaagggtgttttc
attaacacaggtcctgaatttctggttggctgtgactgcaaggatgggtgtcgggacaag
tccaagtgtgcctgccaccagttaactatccaagctacagcctgcaccccagggggccaa
atcaaccccaactctggctaccagtacaagagactcgaagagtgtttacctacaggggta
tatgagtgtaacaaacgctgcaaatgtgacccaaacatgtgcaccaaccggttggtgcag
catggactccaggtccggctacagctattcaagacccagaacaaaggctggggtatccgc
tgcttggatgatattgccaaaggctcttttgtgtgtatttatgcaggcaaaatcctgaca
gacgattttgcagacaaggagggcctggaaatgggggatgagtactttgcaaacctggac
catatcgagagcgtggagaacttcaaggaagggtatgagagtgacatcccctgttcctcc
gacagcagtggcgtagacttgaaggaccaggaagatggcaacagtggtacagaggaccct
gaagagtccaatgacgatagctcagatgataacttctgtaaggatgaggactttagcacc
agctcagtgtggcgtagctatgctacccggagacagacccggggccagaaggagaatggg
ctgtctgagatggcttccaaggacgcccgtcccccagacctcgggcccccacacattcct
cttcctcccacaatccctgccggtgtctgcaatccaccttcctctgaagagacacccaag
agcaaggtggcctcctggttgagctgtaatagtgtcagtgaaagtggcttcgctgactct
gacagccgctcttccttcaagactgctgagggtggggagggccgggctgcaggaggcctc
ggggaggctgagaagacctctgcctcgggcctgggaatcaaggacgaagaagacagcaag
caggctaagaaggaggaccctgatgaccgaaacaagacgtcagttgttcccgaaagctct
cgaaattatggttacaatccttctccagtgaagcccgaaggacttcgccgcccacctagc
aagacaagtatgcatcagagccggcgactgctggccgctgcacagtccaaccctgatgat
gtcctgacactgtccagcagcaccgagagtgagggggaaagtggaaccagccagaagccc
actgctggtcagactccagccacagcagttgacagtgatgatatccagaccatttcttct
ggctctgaaggcgatgactttgaggacaagaagaacatgtctggtccaatgaagcgccaa
gtggcagtgaaatcaacccgaggctttgctcttaagtcaacccatggcattgccattaaa
tcaaccaacatggcctccgtggacaagggggagagtgcacctgtccgtaagaatacacgc
cagttctatgatggtgaagagtcctgctacatcatcgatgccaagcttgaaggcaacctg
ggccgctacctcaatcacagctgcagccccaacctgtttgtccagaatgtcttcgtggat
actcacgatcttcgcttcccctgggtagccttctttgccagcaagagaatccgggctggg
acagagctaacttgggactacaactacgaggtgggcagcgtggagggcaaggagctgctg
tgctgctgtggggccatcgagtgcagaggccgtctgctctag

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