Halobacillus halophilus: HBHAL_4045
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Entry
HBHAL_4045 CDS
T02031
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hhd
Halobacillus halophilus
Pathway
hhd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HBHAL_4045 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhd03400
]
HBHAL_4045 (uvrA)
DNA repair and recombination proteins [BR:
hhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBHAL_4045 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HBHAL_4045 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_21
AAA_16
AAA_23
nSTAND1
AAA_33
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
AAA_22
MMR_HSR1
cobW
BCA_ABC_TP_C
Septin
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
CCG46386
UniProt:
I0JQG6
LinkDB
All DBs
Position
complement(2991831..2994707)
Genome browser
AA seq
958 aa
AA seq
DB search
MASKHISIKGARAHNLKGIDIDIPKNKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGRP
TCPKHGIEINSQTVQQMVDQIMEYPERTKMQILSPVVSGRKGEHAKVFEQLQKEGYVRLR
VDGEMREISEEINLNKNKKHSIEVVVDRIVVKEGVEGRLSDSIETALKLGGGHTLVDVIG
EEELSFSEHHACPICGFSVSELEPRMFSFNSPYGACNRCDGLGTQLEVDIDLVIPDWSLS
LKEHAIAAWEPTSSQYYPQLLKSVADHYGIDMDVPIQDLPKEHMERILYGSGDEKVYFRY
ENDFGKVRENEIFFEGVIPNISRRYRETSSDFIREQMEKYMAQKPCPKCKGNRLNEEALA
VLINGKHIGITTDYSVTEAKEFFDGLELTEKEETIARMILKEISERLSFLANVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSALTGVLYVLDEPSIGLHQRDNDRLINTLKRMRDLDNT
LIVVEHDEDTMLAADYLIDIGPGAGAHGGQIVSQGTPKQVMKSGKSLTGQYLSGKKFIPL
PAERRKPDERFLKIKGAEQNNLKNVNAQIPLGLFTAVTGVSGSGKSTLINEILYKSLSMK
LHRGKQKPGKHKTIEGMEHLEKVIDIDQSPIGRTPRSNPATYTGVFDNIRDVFAQTNEAK
IRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVKYKG
KSIADVLAMTIEEALDFFNNIPKIKRKLQTVADVGLEYIKLGQPATTLSGGEAQRVKLAS
ELHRRSSGRSFYILDEPTTGLHVDDISRLLKVLQRLVDNGDSVLIIEHDLDVIKEADYIL
DLGPEGGDKGGEIIATGTPEEVAETKASYTGHYLKPVLERDRKRMEQRLQSKEKAANE
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaagcatattagtattaaaggagcccgggcccacaatttaaaagggatcgat
attgatattcctaagaataaactggtcgttatgacagggttgtccggttccgggaagtct
tctttagcgttcgataccatatacgcagaggggcagcgacgttatgtcgagtctctaagt
gcctatgcccggcaatttttaggacaaatggataaaccggatgtggattccatagaaggt
ctttctccagccatttcgatcgatcagaaaacgaccagtcgtaaccccaggtcaacagtg
ggaacggtaactgaaatttatgactatctgcgtctgctgttcgcacgcgtaggtcgccct
acttgtccaaagcatggaattgaaattaattcgcagaccgtacagcagatggttgatcaa
attatggagtatccggaaagaacgaaaatgcaaattctctccccggtggtttcaggtcga
aaaggtgagcatgccaaagtatttgaacaattgcagaaagaaggatatgttcgtctgcga
gtagatggagaaatgcgtgagatttccgaggaaataaatttgaataaaaacaaaaaacac
tctattgaagtggtagtggaccggattgtggttaaagaaggagttgaaggccggctatcc
gattcaattgaaacggccttaaaactaggcggggggcataccctggtggatgttatagga
gaggaagaattgtctttctctgaacatcatgcctgcccgatctgcggtttttctgtaagt
gaactggagccgaggatgttctctttcaacagtccttacggggcctgtaaccggtgtgat
ggtctcggtacacagttagaagtagatattgatctggtcatacccgactggtctctttcc
ctgaaagaacatgctattgcggcatgggagccaaccagctcccagtattaccctcaactc
ctgaaaagtgtagcagatcattatggtatagatatggatgtacctattcaggatttacca
aaggaacatatggaacgaattttatatggaagcggcgatgaaaaagtttacttccgttac
gaaaatgatttcggaaaagtccgagagaatgagatttttttcgagggagtaatacctaat
atttcccgtcgataccgtgaaacgagttcagattttatccgtgagcaaatggaaaaatat
atggctcaaaaaccctgccctaagtgtaaaggcaaccgcttgaatgaagaagcccttgcc
gtattaattaacggaaaacatattggcattacaacagattattccgtaaccgaagcaaag
gaattctttgatggacttgaattgactgaaaaagaagaaaccattgctcgtatgatctta
aaagaaatctctgaaagactcagtttcctcgcgaacgtcggactggattatttaaccttg
tcccgttctgccggaacactatcaggaggcgaagctcagcgtatcagactggcaacgcag
attggatccgctctaaccggcgtgctttatgtactggatgagccttctatcggtcttcac
cagcgtgataacgatcggttaatcaatacgctgaagcgtatgagggatctggataacaca
ctgattgtagtagagcacgatgaagatacaatgctcgcagctgattatttaattgatatc
ggaccaggtgctggtgctcacggcggtcagatcgtctcacaggggacacctaagcaagtg
atgaaaagcggtaagtcattaacaggacagtatttgtctggaaaaaaattcatcccgctt
cccgctgagagaagaaaaccggatgaacgcttcttaaagataaaaggtgcagaacaaaat
aacttaaaaaatgtaaatgcacaaatcccattaggtctgttcacagctgtaacaggcgta
tccgggtctggcaaaagtacacttataaatgagatcctatataaatcgctttccatgaaa
ttgcatagaggcaaacagaaaccaggtaagcataaaacaatagaaggtatggagcatttg
gaaaaagtgatcgatattgatcaatcaccaatcggccgtacacctcgttcaaatccggcg
acttataccggagtattcgataatatccgtgatgtatttgctcaaacgaatgaagctaag
attcgcgggtataaaaaaggtcgattcagtttcaatgttaaaggcgggcgttgtgaagcc
tgtcgaggcgatggaattattaaaattgaaatgcatttccttcctgacgtttatgttcct
tgtgaagtatgtgacggcaagcgatataatcgggaaactttagaggtgaaatataaaggg
aaaagtattgcagatgtattagctatgacgatcgaagaagctttggatttctttaataac
attccgaagattaaacggaaattgcagacagtagccgatgtaggtctggaatacattaaa
cttggccagccggctaccacactctccggaggagaagcccaacgggttaagcttgccagt
gaacttcaccgccgctcgagcgggagatccttttacattcttgatgaacctacaacaggt
ctgcatgtggatgatatttcccgtctcctaaaagtactccagcggcttgtagataatggg
gacagcgtattgattattgaacacgaccttgatgtaatcaaagaggcggattatatactc
gatcttggccctgaaggtggagacaaaggcggagaaattattgctaccggtactcctgaa
gaagtagcggaaactaaagcttcctatactggtcattatcttaagcctgtattggaacgg
gatcgtaaacggatggagcaaaggttacagtccaaggaaaaagcagccaacgagtag
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