Halomonas hydrothermalis: CLM76_03370
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Entry
CLM76_03370 CDS
T05117
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
hhh
Halomonas hydrothermalis
Pathway
hhh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLM76_03370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhh03400
]
CLM76_03370
Enzymes [BR:
hhh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CLM76_03370
DNA repair and recombination proteins [BR:
hhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CLM76_03370
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLM76_03370
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLM76_03370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ATH76701
LinkDB
All DBs
Position
complement(740543..742036)
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AA seq
497 aa
AA seq
DB search
MAPSHAAPASFLWHDYETFGADPRRDRPAQFAALRTDAELNEIGDPIELYCKPADDYLPH
PAACLITGITPQKARRKGLPEAQFAQQVQRAMSEPGTCVAGYNSLRFDDEVSRHLFYRNL
LDPYAREWQNGNSRWDLIDVVRAFYALRPEGIEWPLRDDGAPSFKLEHLTAANGIAHEGA
HDAVADVRATIALARLLKTRNPKLFDYLLGLRGKRAVAQQLDLPNAKPLLHISRRYPASR
GCSALVMPLAEHPTNPNGVIVYDLSVAPDDLLSLSAEQIRERVFVSQQDLSEGEARIPLK
VIHINRCPVVFPATVLKDIEGEHKGEYGAIAARLGVDIAACRGHWKTLRAAAGVAQKVRE
VFDAKHDASPQDPDLMLYAGSFFSAADRQQMESVLAMEPWDLVGQRFAFQDPRLEEMLFR
FRARSYPETLEGDEREQWEAFRWMRMNDPALSGFTLKAFAREIERYNQQSLSDHERQILE
ELVMYVEAMMPAQAFDA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatcccatgccgccccggccagttttctatggcacgactacgagaccttcggt
gctgacccacgccgtgatcggcctgcccagtttgcggcactgcgcaccgacgccgagctc
aacgaaatcggcgatcccatcgagctctactgcaagcccgccgacgactacctgccgcat
ccggcagcctgtctgattaccggcatcacgcctcagaaagcccgtcgcaaagggctgccg
gaagcccagtttgcccagcaggtacagcgcgccatgagcgagccgggcacctgtgtcgcg
ggttacaacagcctgcgcttcgacgatgaagtctcccgccacctgttttatcgcaacctg
ctcgacccctacgcccgtgagtggcagaacggcaattctcgctgggacctgatcgacgtc
gtacgggctttttacgcgctgcgcccggagggtatcgaatggccgcttcgtgacgatggc
gcacccagcttcaaactggagcatctgacggcggccaacggcattgcccatgaaggggcc
cacgatgcggtggccgatgtgcgtgccaccattgccctggccagattgctcaagacgcgt
aatcccaagctgttcgactacttgctgggcctgcgcggcaaacgggcggtggcccagcag
ctggatttgccgaatgccaagccgctgctgcatatctcgcgccgctacccggccagtcgt
ggctgtagcgccctggtcatgcccttggccgagcatcccaccaaccccaacggggtgatc
gtctatgacctgagcgtggcaccggacgacctgctctcattgagtgccgagcagattcgt
gagcgggtgttcgtcagccagcaggatctttctgaaggcgaggcgcgtattcccctcaag
gtgattcacatcaaccgctgcccggtggtctttccagccacggtgctcaaggatatcgag
ggtgagcacaagggagagtacggggcgattgctgcccggctgggcgtcgatattgcggcc
tgccgaggacactggaaaaccctgcgcgctgccgccggggtggcccagaaggtcagagag
gtgtttgatgccaagcatgacgcatcgccccaggaccctgacctgatgctgtacgccggc
agctttttctcggcggcagaccgccagcagatggaaagcgtgctggccatggagccatgg
gatctggtgggccagcgctttgcctttcaggacccgcgtctggaagagatgctgttccgt
ttccgtgcccgtagctatccggaaacgctggaaggcgatgagcgtgagcagtgggaagct
tttcgctggatgcgcatgaacgatccggcgttatccgggtttaccttgaaagcgtttgcc
cgagaaatcgaacggtacaatcagcagtcgctgagtgaccatgagcggcagatactggaa
gagctggtgatgtacgtggaggccatgatgcccgcccaggcgttcgacgcctga
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