KEGG   Hydrogenobaculum sp. HO: HydHO_0295
Entry
HydHO_0295        CDS       T02482                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hho  Hydrogenobaculum sp. HO
Pathway
hho02024  Quorum sensing
hho03060  Protein export
hho03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hho00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HydHO_0295
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HydHO_0295
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HydHO_0295
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hho02044]
    HydHO_0295
Enzymes [BR:hho01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HydHO_0295
Secretion system [BR:hho02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HydHO_0295
  Eukaryotic Sec-SRP protein
   HydHO_0295
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 AAA_30 CbiA AAA_7 MobB YqeC ATP_bind_1 CLP1_P AAA_19 AAA_33 AAA cobW MMR_HSR1 AAA_17 nSTAND3 Thymidylate_kin AAA_14 AAA_5 Fer4_NifH TEX12 AAA_16 AAA_18 APS_kinase Viral_helicase1 NTPase_1 AAA_31 Zeta_toxin AAA_28 ArsA_ATPase
Other DBs
NCBI-ProteinID: AGG14631
UniProt: M1RC02
LinkDB
Position
253349..254656
AA seq 435 aa
MLELLTEKISGSLEKLKGAKKLNEKLVNDTLRDIRAALLEADVDYDVAKDFIKRLRERIF
SEEIKTHLSPTDMIIMSVYDELVKTLGGNASPLEEGVVMFVGLQGTGKTTTIGKLANLMK
KNGRSVMTVSTDVRRPAAMLQLKRVSELAGVEYLEFSPDKNPVDIAKEAFEAFKSKKYDY
LFLDTAGRLHIDNELMEELRAIKEAVKPSEVIYVADSMQGQEALSVAKTFNEVVGLTGAI
LTKMDGDTRGGVALSIKDAIGIPIKYIGVGEKLEDIDQFYPDRIAQRILGLGDLQSLIEK
AEQVISEDEAQAITYKMMRGEFDLNDLKKNISFMMNMGPLDKVLSMLPGVGSQLKNIKID
QKIFKRIIAMIDSMTPEERANPNIINLSRKQRIAKGSGTTVSDVNKLLKQYQDMKKMIRK
LKNQKSPFGGLGLPF
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgctggaacttttaacggaaaagattagcgggagtttagagaagctaaaaggtgctaaa
aagttaaacgaaaagttagttaacgatacacttagagacattagagctgctttgttggaa
gctgatgtagattacgatgtagcaaaagattttattaaaagactaagagaacgtattttt
tctgaagagataaaaacccacctatcccccacggatatgattataatgagcgtttacgat
gagcttgttaaaacgcttgggggaaatgcttctcctttagaagaaggggtggtaatgttt
gttggtcttcaaggtactggtaaaactacaacaataggtaagctggcaaacctcatgaag
aaaaacggtagaagcgttatgacagtatctacagacgtaagaagaccagcagccatgctt
caattaaagcgtgtatctgagttagcgggtgtagaatatttagaatttagtccagacaaa
aaccctgttgatatagccaaagaggcgtttgaggcttttaaaagcaaaaaatacgattat
ttgtttttagacaccgccggtaggcttcatatagataacgaattgatggaagagttaaga
gctatcaaagaagctgtaaagccgtctgaggttatatacgtagccgatagcatgcaaggg
caagaagctctctctgtagcaaaaacttttaacgaagttgtagggcttactggagctatt
cttaccaaaatggatggtgataccagaggtggcgtagcgctttctataaaagatgccata
ggtatccccataaagtatataggtgtgggtgaaaagttagaggatatagatcagttttat
ccagatagaattgctcaaaggatattaggtcttggtgatttgcaaagtcttatagagaaa
gccgagcaggttattagtgaggatgaggctcaagctataacctataaaatgatgagaggt
gagtttgatttaaatgacttgaagaaaaatataagttttatgatgaatatgggtcctctt
gataaagtgctttcaatgttaccaggggttggttcccaactgaaaaatataaagattgat
caaaagatatttaaacgtattatagctatgatagattctatgactcctgaagaaagggca
aatccaaacattataaacttaagtcgtaaacaaaggatagccaaaggtagcggtactacc
gtttccgatgttaacaagcttttaaaacaatatcaggatatgaaaaagatgattagaaag
ctgaaaaatcaaaaatcaccgtttggtggtttggggcttccgttttaa

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