Hydrogenobaculum sp. HO: HydHO_1489
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Entry
HydHO_1489 CDS
T02482
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hho
Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:
hho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hho03009
]
HydHO_1489
Enzymes [BR:
hho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HydHO_1489
Ribosome biogenesis [BR:
hho03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HydHO_1489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Cmr1_like_C
Motif
Other DBs
NCBI-ProteinID:
AGG15797
UniProt:
M1R955
LinkDB
All DBs
Position
complement(1417293..1418219)
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AA seq
308 aa
AA seq
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MPQIKITPDIAGERIDVLISNIYKDISREYIKRIIKENGVLINGEKVFKSSKKVFENDVL
EFEIPPPKKLDVKAQDIHIDILYEDNDLAVVVKPSGMPSHTGPGHDENTLVNALLAKFGD
LSVIGGVERPGIVHRLDRYTHGLMVIAKNDISHQKLSLMFKNKEVDKRYKAIVYGIPRFK
EQTIETFIRRHPTNRLKFEVSNEGKLAITKYSLEKPLKNASLLDIKIYTGRTHQIRVHMS
YLGHPIVGDTLYGYKHSYFDKTLEHMIGERFLLVAYKLKFLHPKSQKPMEFEIDMPDYFK
NVLKYLES
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccccagataaaaataacccctgatatagccggtgaacgtatagacgtcttaatatca
aacatatataaagatatatcaagggagtatataaaaaggataataaaagaaaacggtgtt
ttgataaacggtgaaaaggtttttaaaagctcaaaaaaggtttttgaaaacgatgtattg
gagtttgaaataccacctccaaaaaaactagacgtaaaagcccaagatatacatatagat
atactctatgaagataacgatttggctgtggtggtaaaaccctctggtatgccttctcat
acaggaccaggacacgatgaaaacacgcttgtaaacgctttgcttgctaagtttggagat
ttgtctgtaataggtggggtagaaagaccgggcattgtgcataggcttgatagatatact
catgggcttatggtaatagcaaaaaacgatatcagccatcaaaagctatctttgatgttt
aaaaataaagaagtagacaagcgttataaagctatagtatacggtataccaaggtttaaa
gagcaaaccatagaaacttttataagaagacatccaaccaacagattaaaatttgaagtg
tcaaacgagggaaaactggccataacaaaatatagcttagaaaaacctctaaaaaatgcg
agcttgctagacataaaaatatacacaggaagaacccatcagataagagtacatatgtct
tatttaggacatcctattgttggggatacgctttatggctacaagcactcttattttgat
aaaacccttgaacatatgataggtgagaggtttttgctggtggcttacaagctgaagttt
cttcatcctaaaagccaaaaaccaatggaatttgaaatagatatgccagattattttaaa
aacgttttaaaatatttagaatcctaa
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