Haemophilus influenzae PittEE (nontypeable): CGSHiEE_07565
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Entry
CGSHiEE_07565 CDS
T00543
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hip
Haemophilus influenzae PittEE (nontypeable)
Pathway
hip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGSHiEE_07565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hip03019
]
CGSHiEE_07565
Enzymes [BR:
hip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGSHiEE_07565
Messenger RNA biogenesis [BR:
hip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGSHiEE_07565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABQ98832
UniProt:
A5UDI1
LinkDB
All DBs
Position
complement(1500965..1502212)
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AA seq
415 aa
AA seq
DB search
MQQDYLSQQRFSDLSLHPIVRDTLAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKT
MAFLTATFHHLLTHQDPNLEYPHPRALILASTRELAVQISNDAEFLAKACGLKTALAYGG
DGYDKQLQAIERGVDILIGTTGRVIDYVKQGVIGLDEIQVVVLDEADRMFDLGFIRDIRY
LLRKCPTPQVRLTMLFSATLSYKVRELAFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQ
DKMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQ
FTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFAC
EEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRLKRAVPPQGHTRHRSYHTK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagattatttaagccaacaacgattctccgatctttctctacatccgattgta
cgagatactttggcaaaaaaaggctttgatttttgtaccccaattcaggctttatccttg
cctatcagtttaaatggacgagatgtcgcaggacaagctcaaactggtacaggcaagaca
atggcttttttaacggctacttttcaccatcttttaactcaccaagatcctaatcttgaa
tatcctcacccaagagctttgattttagcatctactcgagaattagcggtgcagattagt
aatgacgcagaatttcttgcaaaagcctgtggattaaagaccgcacttgcctatggtggc
gatggttatgacaaacaactacaagcgattgagcgtggcgtcgatattttgattggtacg
acggggcgagttattgattatgtaaaacaaggcgtaattggtttagatgaaattcaagtt
gtcgtgctagatgaagcggatcgaatgttcgatcttggatttatccgtgatattcgttat
ttattgcgtaaatgccccactccgcaagtgcgtttaacgatgttattttcagcgacgctt
tcttataaagtgcgtgaattagcatttgaagatatgaatgatcctgaatatattgaaata
gaaccagaacaaaagacaggtcatcgcattaaagaagaacttttttatccatctaatcag
gataaaatggcacttctcttaaccttaatggaagatgaatggcctgagcgttgtattgta
tttgctaatacgaaacatcgttgtgaagaaatttggggttatttggctgctgatgggcat
cgtgtcggcttactgactggcgatgtagcacagaaaaaacgtttatcgttattaaaacaa
tttactgatggtgatttggatattttagtggcaacagatgtggccgctcgtggcttgcat
atttctgatgtgacgcatgttttcaattatgatttacccgatgatagagaagattatgtt
caccgaatcggccgcactggacgagcaggggaaagtggtgtttcgattagtttcgcttgt
gaagaatatgcgatgaatttaccagcaattgaagaatatattggccattctatccctgtg
agccaatatgaaacagaagccttgcttgaactgccgaaaccgtatcggttaaaacgtgcg
gtgccaccgcaaggacatacaagacatcgttcttatcacacaaaatag
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