KEGG   Heterobasidion irregulare: HETIRDRAFT_151541Help
Entry
HETIRDRAFT_151541 CDS       T03455                                 

Definition
(RefSeq) hypothetical protein
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
hir  Heterobasidion irregulare
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hir00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    HETIRDRAFT_151541
Enzymes [BR:hir01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HETIRDRAFT_151541
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     HETIRDRAFT_151541
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
Unknown
AA seq 1414 aa AA seqDB search
MMQPTPAPTSPPSSQILAQLFDEEPDFPPPPPVRHGTAPFSVVAGLFDKLQSERKPEKRR
KLLHAWFDHWRKQVGYDLYPVLRLILPQKDRERAIYGLKERNLAKAYIKLIPLGSKDPDA
IQLLNWKKPSDRYRSSGDFPLVLYEVVNKRSSVTESLLSVHELNNILDDLSKNTGKHDAQ
VKILQRIYNSTTPEEQRWIVRIILKGGQDRPTFCPDLNVNVKETTIFSVFHPDAHDLFNT
CSDLKKVAWELWDPARRLNAEEKAVQLFHAFAPMLCKRPTKRIEESVKDMGGRTFILEEK
LDGERMQLHKRGNEYFYCSRKGKDYTYLYGKHVGTGSLTPFIDAAFDERIEDVILDGEML
VWDPVSEKNLPFGTLKTAALNDNKKEFNPRPCFKIFDLLYLNGISLIHRSTKFRKRNLKA
YITEIHGRIEFVAEFEAKTAKDVREKMDEIMANRGEGSNRNIWWVPIWSSVRFPQCPHQE
AQLPTTDPEDEEAESRHSSVPYLMIAILMKGRNPSSGFSYTDYLWIRDKPWKTWDQQNSP
SFLQTAARSLEDKGDVYLDPEDSFIIKVKAAEITSSDQYHLGMTMRFPRALSIRDDLSIH
DCVTATAVMESHRSEKKRKAENEAGKFTKKRKGNGKGPLKPLMLPEYQSTNVKGVQVESD
LFEGMTFTVVSDPRSRTRDADTQEMFKIIRANGGKIVQIAKNQPGLLVVYGGRTTPYDIK
SIMDKGLHDIIRPQWIIDCVAASEKVAMSKKYFFHATAVRMHSDDYNIEDDSSANDELNA
VRESGTPTAPALIQESRREDDEKTDTGDEDSELRDWFQIQRKHTAPTSAEMSDSATDPDS
DHEDFEEPIGVNDEWLSVDIPEESTDNEVSQDSTKPSLDVKMGENDNAMEYDQELIFKHL
CFYLDSPDNARKHGMPCKAKHEDDISRNFFEMDKMIIQNGGAVVELDDPKLTHVIIDKRD
DSRRRELISRTSKPKRRNIVVADWIQACLDEDTLLDETGLTAFSTVTVYLPHYVSITTED
NNPGPEELDFLEDVLDRHEISDNDVENSIELIAKEYNKQDDANMKVAFHILKRVYDNLQN
AGEHGTQKEDVSIHPDSHLFFVNAFEMPAWHWSQEKGTFEQSTKQLLGRADQRFLLFGML
AHTKEGNICLEDQDGFVELDFSQLNQPSEGFFTEGAFVLVEGDYTEDQTFIVIAIGHPPC
ESRQTARSIYGHVDFLGKGATTPLEDSQYALRIQEDLSDVTFFVLSDVWLDHPDTLRGLQ
KLFDNCIETNFIPKVMIMCGNFTSRGISQGSNRDISKYQEGFDSLADLIASYPQMTQNTH
FVLVPGPLDLAINSILPRRPLLSSFVSRLKSKVPKLQLGSNPYRIKFFDQEIVIFREDMM
ARMLRNLVGVKPTVRGEELKRYVRVKNRSTLVQD
NT seq 4245 nt NT seq  +upstreamnt  +downstreamnt
atgatgcaacctacacctgctcccacctctcctccaagttcccaaatccttgcacaactg
ttcgatgaagaacccgacttcccgccaccacctccagttcgccatggaactgctccattc
tccgtggttgctggcttgtttgacaaactacagagcgagagaaagccagagaaaagacgg
aagcttctgcatgcatggtttgatcattggcgaaaacaagtgggctacgacctttaccct
gtccttcgcctcattctgccccagaaagatcgcgagcgagcaatttatggcctgaaagaa
aggaatttggccaaagcctacattaaactgattccattaggttcaaaggacccggatgca
atccagcttctaaattggaagaagccttcggacagatacagatcttctggcgatttccct
ctcgtcctatacgaagtcgtcaacaagcggtcttctgtgactgagagtttgttatcagtc
catgagctgaataatatattggacgatctttctaagaataccggaaaacatgacgctcag
gtcaagatattgcaacgcatctacaactctaccacgccggaggaacagcgttggatcgta
aggattatcctgaaagggggtcaagacaggccaaccttttgtccagacctgaatgttaac
gtcaaagaaaccacaatcttctcggtttttcacccagatgcccacgatttgttcaatacc
tgctcagacctcaaaaaagtggcatgggagctctgggatcctgcgcgccggctgaacgct
gaggaaaaagcggtgcaattgtttcatgctttcgcacccatgctctgcaagaggccgacc
aagcgcattgaagaatcggtcaaagacatgggaggacgaacattcatcttggaggaaaaa
ttagatggggaacgcatgcagcttcacaaaagaggcaatgaatatttctattgttcgagg
aaaggcaaagactatacatatctgtatggcaagcatgtcggtacaggaagtttgacaccc
ttcattgatgctgcattcgatgagcggatagaagatgtcatcttggatggagaaatgctt
gtctgggacccagtctctgagaaaaatctaccattcggaacgctcaagactgctgcgctg
aatgacaacaagaaagaattcaatcctaggccgtgcttcaagatattcgatctcctctac
ctgaatggcatatccctcattcacaggtccaccaaatttcgcaaacgcaatcttaaagca
tatattacagagattcacgggcgaattgaatttgtcgcagaatttgaagctaaaactgca
aaagatgtccgtgaaaaaatggacgaaatcatggctaatagaggagaagggtcaaaccgg
aatatatggtgggtgccaatatggtcctctgtgcgtttcccgcaatgtcctcatcaagaa
gcccagctgccaactacggatccggaagacgaggaggcggagtctcgacactcatctgtg
ccgtacttgatgatcgcaattctgatgaaggggaggaacccaagctctggattctcctac
acggactatttatggattcgagacaaaccatggaagacctgggatcaacaaaactcaccc
agctttttgcaaaccgcagcgaggtctctcgaggataagggcgatgtatatcttgaccct
gaagattcattcatcatcaaggtcaaggctgctgagattacatcttcggaccagtatcac
ctcggcatgacgatgcgcttcccgagagccttgtcaatccgtgatgatctatcaattcac
gattgcgtaaccgctacagctgtcatggagagtcatcgatctgaaaagaaaaggaaggca
gagaatgaagcaggcaaattcacaaagaaacgcaagggcaatggaaaaggacctctcaag
ccgttaatgctaccggagtatcaaagcacgaatgtcaagggtgtacaagtcgaatccgac
ttatttgaggggatgactttcacagtagtatcagatcccaggtcaagaacgcgagacgca
gacacacaagaaatgttcaagataattcgggcaaatggcggaaagattgtccagattgca
aagaatcagcctggtcttttagtggtttatggagggagaacgaccccgtacgatatcaaa
tcaatcatggacaaggggttgcacgatatcatccgaccgcagtggatcatcgactgtgta
gctgcatcggagaaagttgctatgtcaaagaagtacttcttccatgccaccgccgtgcgg
atgcacagcgacgactacaatatcgaggatgatagtagcgcgaacgacgagttgaatgct
gtgcgcgaatcgggtacgccaactgcgcccgcactcatacaagaatcgagacgtgaagac
gatgagaaaacggataccggggacgaggattcagagctgagagattggtttcaaatccaa
cggaagcacaccgctccaacatcggcagagatgtcggactcagctactgatcctgattcg
gatcatgaggatttcgaagagcctattggtgtcaatgacgaatggttatccgtggacata
ccagaggaatcgacggataatgaggtatctcaggattccactaagcccagccttgacgtg
aaaatgggcgaaaatgacaacgccatggagtatgatcaagagcttattttcaaacatcta
tgcttctacctagactctcctgacaatgctcggaagcatggaatgccgtgcaaggccaag
cacgaagacgatataagccgaaatttcttcgagatggataagatgatcattcaaaacgga
ggggccgtcgttgagctagacgacccgaagctcacacatgtcataatcgacaagcgtgat
gatagccgtcgtcgtgagctgatctccagaacgtccaaacccaagcggcgcaatattgta
gttgctgattggatccaggcatgcttggacgaagacaccctactggacgaaactggtcta
accgcattttcaactgttaccgtatacctgccacactatgtcagtatcacgacagaggat
aataatccaggtcctgaagaactcgatttcctggaggatgtcctagacagacacgagatt
tccgacaatgatgtggagaattcaatagagctcatagcgaaggagtacaataaacaagat
gacgcgaatatgaaagttgcattccacattctaaagcgcgtgtacgataatctccagaat
gcaggggagcatggtacgcagaaagaagacgtctccatccatccggacagccatcttttt
tttgtcaacgccttcgaaatgcccgcgtggcattggtctcaggaaaagggtacctttgaa
caatctacgaagcagctcttgggacgcgctgaccagcgattcttgctcttcggcatgctt
gcccacacaaaagaaggaaatatatgtcttgaagatcaagatggctttgttgagcttgat
ttctcacaacttaaccagccgagcgaaggcttttttacggaaggggccttcgttctagtt
gaaggggactacacagaggatcaaactttcattgtcattgcgatagggcatcctccgtgc
gaaagcagacaaacagcgcggtcaatctacggccatgtagacttcttggggaaaggtgct
actacccctttagaagactcccaatatgcgctccgcatccaggaagatctttcagatgtt
acgtttttcgtcctgtccgatgtttggctcgatcatccggatacccttcgcggccttcaa
aaactctttgacaactgcattgaaaccaatttcattcccaaagtaatgattatgtgtggc
aacttcaccagtcgaggcatcagccagggaagcaacagggatatctcaaagtaccaagag
ggatttgattcattagccgatttgattgcttcctatcctcaaatgacgcaaaatacacat
ttcgtactggtgccaggaccattggatttagcgatcaattccatcttacctcgacgacct
ctgctctcgtctttcgtctcccgcttgaagtcaaaggtaccgaagttacaactgggcagt
aatccatatcgtatcaaattttttgatcaagaaatcgtcatcttccgggaagacatgatg
gcaaggatgttacgaaacctcgttggagtgaaaccgacagtcaggggtgaagagctgaag
agatatgtgcgtgtaaagaatcgcagcacactggttcaggactaa

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