Hyphomicrobium sp. MC1: HYPMC_0603
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Entry
HYPMC_0603 CDS
T01557
Name
(GenBank) methylthiotransferase; putative ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmc03009
]
HYPMC_0603
Enzymes [BR:
hmc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HYPMC_0603
Ribosome biogenesis [BR:
hmc03009
]
Prokaryotic type
ribosomal protein modification factors
HYPMC_0603
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
NTPase_1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CCB63837
UniProt:
F8JBF1
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All DBs
Position
593558..594952
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AA seq
464 aa
AA seq
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MARPSLKIKAKASAKVRRLAHGATAEQARTPKVGFVSLGCPKALVDSERIITKLRSEGYA
IAREYSGADVVVVNTCGFLDSAKQESLDAIGEAMNGNGRVIVTGCFGVEEGRIREAHPGV
LAVTGPHQYEQVVEAVHDAVPPLHDPYVDLVPPEGLRLTPRHYAYLKISEGCNNRCTFCI
IPSLRGDLASRPANHVMTEAERLVNAGVKELLVISQDTSAYGLDLKYQESAWKGGQLKAR
FLDLSRALGDLGAWVRMHYVYPYPHVDDVIPLMAEGKILPYLDIPFQHASPAVLKKMRRP
ASQEKTAERIRRWRDVCPDLAIRSTFIVGFPGETEDDFAFLLDWLKEAKINRAGCFKYEA
VEGAQANEIEGAVPEEVKEERWHRFMEAQKEVSGELLRGKVGTTIDVIIDEVDEDGAIGR
SKWDAPEIDGNVFLNGDGDVKPGDIVKANIIEADEYDLWGDRVV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaccctctctaaagatcaaggcgaaggcaagtgcgaaggtgcggcggctggcg
catggcgcgacggctgagcaagcgcgcacgcccaaggtcggcttcgtgtcgctcggttgt
ccgaaggcgctggtcgatagcgagcgcattattaccaagctgcgttcggaaggctatgcg
atcgcgcgcgagtattccggcgccgacgttgtcgtcgtcaatacctgcggttttctggat
tccgccaagcaggagagcctcgacgctatcggcgaagcgatgaacggcaatggccgggtg
atcgtgacagggtgcttcggcgtcgaagaagggcgcattcgcgaggcgcatccgggcgtg
ctggcggtaacggggccgcatcaatacgagcaggtcgtcgaagccgttcacgacgcggtg
cctccgctgcacgatccttatgtcgatctcgtgccgccggaaggtttgcggctgacgccg
cgccactacgcgtatctgaagatttcggaaggctgcaacaaccgctgcacgttctgcatc
attccatcgttgcgcggcgatcttgcgagccgccccgcgaaccacgtgatgacggaagcg
gagcggctggtgaatgcgggcgtgaaagagctgctcgtcatcagccaggacaccagcgcg
tacggcctcgatcttaaatatcaagagagtgcgtggaagggcggtcagctcaaggcgcgc
ttcctcgacctgtcgcgtgcgctgggcgatctcggtgcgtgggttcggatgcactacgtc
tatccttatccgcacgtcgatgacgtcattccgctgatggccgagggcaagattttgcct
tacctcgacattccgtttcagcatgcgtctccggctgtcttgaagaagatgcggcgtccg
gcctcgcaggagaagacggcagagagaattcggcgctggcgcgacgtttgtccggatctt
gcgatccgctcgacgttcatcgtcggctttcccggtgagaccgaagacgatttcgcgttt
ctgctcgattggctgaaggaagcgaagatcaaccgcgccggatgtttcaagtatgaagcg
gttgaaggcgctcaggcgaacgagattgaaggcgcggttccggaagaagtgaaggaagag
cgctggcatcgcttcatggaagcgcagaaagaggtcagcggcgaattgcttcgcggcaaa
gtcggcacgacgatcgacgtcatcatcgacgaggttgacgaggacggcgctattggccgc
tcgaagtgggatgcgccggagatcgacggcaacgtgtttctcaacggtgatggcgatgta
aagcccggcgatatcgtcaaggcgaacatcattgaggccgacgaatacgacctctggggc
gaccgggtggtttaa
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