Hyphomicrobium sp. MC1: HYPMC_0682
Help
Entry
HYPMC_0682 CDS
T01557
Symbol
cobD
Name
(GenBank) Cobalamin biosynthesis protein cobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00860
Porphyrin metabolism
hmc01100
Metabolic pathways
hmc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HYPMC_0682 (cobD)
Enzymes [BR:
hmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
HYPMC_0682 (cobD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
FA_desaturase
DUF5455
IreB
DUF6074
Motif
Other DBs
NCBI-ProteinID:
CCB63916
UniProt:
F8JCD1
LinkDB
All DBs
Position
672147..673121
Genome browser
AA seq
324 aa
AA seq
DB search
MTAAQTLFVLVGALALEATFGYPDWLYQRIGHPVSWLGRFISFLDKKLNRETDSSQVRRN
KGVLALGILIVITGVIAWALEQFFDHVAFGAFFIALLASMLIASRSLYTHVEDVARALDQ
YGLDEARQAVGRIVGRNPKTLDAHGVARAAIESLAENASDGIVAPVFWFAILGLPGLVVY
KAINTADSMIGHRTPRHEAFGWASARLDDFVNLPASRLTALLLALASIFTPGASVAGTLE
AVARDASKHRSPNAGWPESALAGALGLKLNGPKVYGETRVEDAYMGDGKRDATAEDIRAA
LRLTTTAWGVMVGSLLLIAIILPG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtgacagccgcacaaacgctcttcgtccttgtcggcgctctcgcgcttgaggccacgttc
ggatatccggactggctttatcagcgtattgggcatcccgtatcgtggctagggcgattc
atttcctttctcgataaaaagctcaatcgggaaaccgacagctcgcaagtcaggcgcaac
aagggcgtgctggcgctcggcattcttatcgtcattaccggtgtcatcgcctgggcgttg
gagcagtttttcgatcacgttgccttcggggcgtttttcattgcgctcttggcgtcgatg
ctgattgcgagccggagcctttacacgcacgtcgaagatgtggcgcgggcgcttgatcaa
tatggtctggacgaggcgcggcaggcggtcggtcgtatcgtcgggcgcaatccgaaaacg
ctcgatgcgcacggcgtggcgcgtgcagctattgaaagccttgctgaaaatgcctcggat
ggcatcgtggcgccggtgttctggtttgcgatcttggggctgccaggccttgtcgtttat
aaggccatcaacacggctgacagcatgatcgggcatcggacgccgcggcatgaggcgttc
ggttgggcgtcagcgcgtctagatgatttcgtcaatctgcctgcttcgcgattgacagcc
ctgctgctggcgctggcgagcatcttcacgccgggtgcgtcggtggcgggaacgctcgaa
gctgtggcgcgcgatgcatcgaagcatcgttcgccgaacgcgggctggccggagagcgcg
ctcgcgggcgcactcgggctgaagctcaacggtccgaaggtctacggcgagacgcgcgtt
gaagatgcctacatgggcgacggcaagcgcgatgcgacagcagaagatattcgcgctgcg
ctgcggctgacgacgacggcatggggcgtcatggtcggcagcctgctgctcatcgcaatc
atcttgccaggctga
DBGET
integrated database retrieval system
