Hyphomicrobium sp. MC1: HYPMC_3550
Help
Entry
HYPMC_3550 CDS
T01557
Symbol
cofE
Name
(GenBank) F420-0:gamma-glutamyl ligase
KO
K12234
coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:
6.3.2.31
6.3.2.34
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00680
Methane metabolism
hmc01100
Metabolic pathways
hmc01120
Microbial metabolism in diverse environments
hmc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
HYPMC_3550 (cofE)
Enzymes [BR:
hmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.31 coenzyme F420-0:L-glutamate ligase
HYPMC_3550 (cofE)
6.3.2.34 coenzyme F420-1:gamma-L-glutamate ligase
HYPMC_3550 (cofE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F420_ligase
Phosphatase
Motif
Other DBs
NCBI-ProteinID:
CCB66760
UniProt:
F8JG59
LinkDB
All DBs
Position
complement(3405028..3405798)
Genome browser
AA seq
256 aa
AA seq
DB search
MQTAPVTLFALRGVPLIEPGDDLAAILAAAVRDNGVGLQDSDILVVAQKIVSKAEGRYVD
LEAVVPSEEAKALAQRSGKDPRHVETILSESDDIVKVGPHLIIAAHKLGFVMANAGIDES
NISHGEGAGRLLLLPCDPDGSAASIKAALDADFDVAIGVIINDSFGRPWRNGVVGIAIGS
AGVPSLVDLVGSSDLFGRELRVTEVAIADELASAASLLMGQAGAGLPAVIVRGFQASAPE
RSASVLVRDKERDLFR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgcgcccgtcacattgtttgctttgcgaggagttccgttgatcgagccaggc
gacgatctggctgcgatcctcgcggcggcggttcgagataacggtgtcggtctgcaagac
agcgatattctggttgtcgcgcaaaagatcgtatcgaaggccgaaggccgctatgtcgat
ctcgaagccgtcgtgccgtcggaagaagccaaagctctggcgcaacgaagtggcaaagat
cctcggcacgtcgaaacaattctcagtgaatccgacgatatcgtcaaagtcgggccccac
ctcattattgccgcccacaagctcggtttcgtgatggccaatgccggcatcgacgagtcg
aacatctcccatggcgagggagcaggccgattgcttctcctgccttgcgatcccgacggc
agcgcagcatccatcaaagcggcactcgatgcggatttcgacgtggcgatcggcgtcatc
attaacgacagtttcggtcggccgtggcgcaatggcgtcgtggggatagccatcggcagc
gcaggagttccatcactggtcgatcttgttggcagctctgatctctttggtcgcgagttg
cgggtgacggaagttgccattgccgacgaacttgcgtcggcagcttcgcttttgatgggg
caggcgggggcggggttgcctgccgtgattgttcgcggctttcaagcgagcgcacctgag
cgctcggcgtcggtgctcgttcgcgacaaggagagggatctctttcgatga
DBGET
integrated database retrieval system