Hyphomicrobium sp. MC1: HYPMC_4600
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Entry
HYPMC_4600 CDS
T01557
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00020
Citrate cycle (TCA cycle)
hmc00190
Oxidative phosphorylation
hmc00650
Butanoate metabolism
hmc01100
Metabolic pathways
hmc01110
Biosynthesis of secondary metabolites
hmc01120
Microbial metabolism in diverse environments
hmc01200
Carbon metabolism
Module
hmc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hmc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hmc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HYPMC_4600 (sdhA)
00650 Butanoate metabolism
HYPMC_4600 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
HYPMC_4600 (sdhA)
Enzymes [BR:
hmc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HYPMC_4600 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
DAO
Thi4
FAD_binding_3
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
CCB67809
UniProt:
F8JD49
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Position
4425336..4427183
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AA seq
615 aa
AA seq
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MSQLNGKANGAGAAPSQIGKAYPLHDHVYDVVVVGAGGAGLRATLGCAEAGLKTACVTKV
FPTRSHTVAAQGGVAAALGNMGRDDWRWHMYDTVKGSDWLGDQDAIEYLCRNAPAAVYEL
EHYGVPFSRTEDGKIYQRPFGGMTTDYGEGPPAQRTCAAADRTGHAMLHTLYGQSLRHAA
EFFIEYFALDLIMDQDGACRGIIALNLDDGTLHRFRAKKTILATGGYGRTYFSCTSAHTC
TGDGNAMVLRAGLPLQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSKGERFMERYAP
HAKDLASRDVVSRSMTIEIREGRGVGPDADHIYLHLDHLDPKILAERLPGITENAKVFAG
VDLRRQPIPVLPTVHYNMGGIPTNYHGEVLTKKNGDPDHVVPGLMAIGEAACVSVHGANR
LGSNSLIDLVVFGRAAGLRCAETIEQGAMQSDLPKDAHEPALARLDHFRNASGSTPTAAL
RLRMQKIMQSNCAVFRDGPVLKEGVEKITQVWRDAADISVTDRSLVWNSDLVETLEFDNL
IAQAAVTVVGAENRQESRGAHAREDFPKRDDVNWMKHTLAWADYGTQSVKLDDRPVHTKT
MTNEVKYIEPKARVY
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaattgaatggcaaggccaacggcgcgggtgccgcgccgtcgcagatcggcaaa
gcctatccgctgcacgatcatgtctatgatgtcgttgtcgtcggtgcgggtggcgcagga
ctgcgtgcgacgcttggctgcgcggaagcaggtcttaaaacggcttgcgtgacgaaggtg
ttcccgacgcgctcgcatacggttgcggcgcaaggcggtgtggcggcggcgctcggcaac
atgggccgcgacgactggcgttggcatatgtacgacaccgtcaaaggctccgactggctc
ggcgaccaagacgccatcgaatatctgtgccggaacgcgccggccgccgtctatgagctc
gagcactatggcgtgccgttctcgcgcaccgaagacggcaagatctaccagcgcccattc
ggcggcatgacgaccgactacggcgagggtccgccggcacagcgcacgtgtgctgctgcc
gaccgcaccggccacgcgatgctgcatacgctttacggacagtcgctgcgccacgcggcg
gaattcttcatcgaatatttcgcgctcgatctcatcatggatcaggacggtgcatgccgg
ggcatcatcgcgctcaatctcgatgacggcacgctgcatcgcttccgtgcgaagaagacc
attctggcgacgggtggttacgggcggacgtatttctcgtgcacctcggcgcatacctgc
accggtgacggcaatgccatggttctgcgcgcaggtttgccgctgcaggacatggaattc
gtgcagttccatcccaccggtatttacggcgcgggcgtgttgattaccgaaggtgcgcgc
ggcgaaggcgggtatctgacgaactccaagggcgagcgcttcatggagcgctatgcgccg
cacgccaaagacctcgcctcgcgcgacgtcgtctcgcgctcgatgacgatcgaaattcgc
gaaggtcgcggcgtcggcccggatgccgaccatatctatctgcatctcgaccatctcgat
ccgaagattctggccgagcgtctgccgggcattacagagaatgcgaaggtgttcgcaggc
gtcgatcttcgccgtcagccgatcccggtgttgccgacggtgcactacaacatgggcggc
atcccgacgaattatcacggcgaagtgctgaccaagaagaacggcgatcccgatcatgtc
gtgccgggcctgatggcgattggcgaagcggcgtgcgtctcggtgcacggcgccaaccgt
ctgggctcgaactcgctgatcgatctcgtcgtgttcggtcgtgcggccggtctgcgctgt
gccgagacgatcgagcaaggcgcaatgcagtcggacctgcccaaggacgcacacgaaccg
gcgcttgcccgcctcgatcatttccgcaacgccagtggctcgacaccgacggcggcgctg
cgcctgcgcatgcagaagatcatgcagtcgaactgtgccgttttccgcgatggcccggtg
ctgaaagaaggcgtcgagaagatcacgcaggtctggcgcgatgcggcggatatttccgtc
accgaccggtccctggtgtggaattccgatctcgttgaaacgctggaattcgacaacctg
atcgcgcaagcagccgttacggtggtaggcgccgaaaaccgtcaggaaagccgcggcgcg
cacgcgcgcgaagattttccgaagcgtgacgatgtcaattggatgaagcacacgctggca
tgggccgattacgggacgcaatcggttaagctcgacgatcgtccggtgcacacgaagacc
atgaccaacgaggtcaaatatatcgagcccaaagcccgcgtttattga
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