Haloferax mediterranei: HFX_0208
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Entry
HFX_0208 CDS
T02129
Symbol
alaS
Name
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
hme
Haloferax mediterranei
Pathway
hme00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HFX_0208 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hme01007
]
HFX_0208 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hme03016
]
HFX_0208 (alaS)
Enzymes [BR:
hme01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HFX_0208 (alaS)
Amino acid related enzymes [BR:
hme01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HFX_0208 (alaS)
Transfer RNA biogenesis [BR:
hme03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HFX_0208 (alaS)
Prokaryotic type
HFX_0208 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
AFK17949
UniProt:
I3R139
LinkDB
All DBs
Position
195592..198360
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AA seq
922 aa
AA seq
DB search
MSELESEYRLDYFEEEGFYRKQCPVTGVHFWTRDPDRETCGEPPADDYTFIDNPGFDEEY
TLEEMREKFLSFFEEHDHERIEPYPVAANRWRDDVLLTQASIYDFQPLVTSGETPPPANP
LTISQPCIRMQDIDNVGKTGRHTMAFEMMAHHAFNAREEAGDKYAYEGEVYWKDETVRLC
DEFFESLGADISEITYIEDPWVGGGNAGPAFEVLYRGAELATLVFMSMKQDPDGEYELKD
GNSYSPMDTYIVDTGYGLERWTWVSQGTPTVYEAVYPDMIDFLKENVGIEHTDDEEELIH
RAAKLSGHLDIDEIDDLATARAEVADELGVDTQRLTSLLRPLEDIYAIADHCRTLAYMFG
DGIVPSNVGTGYLARMVLRRTKRLVDNLGVDAPLDELVDMQAERLDYQNRDTIRDIVRSE
ERKYRKTLERGSRKVQQLADDYAETGEPIPVSELIELYDSHGIQPDMVQEIAEERGATVD
IPDDFYSLVADRHEQVDAETAAEGHDERLGDLPATDKLYYDDQERTEFEAVVLDVFEREE
GYDVVLDQTMFYPEGGGQPADHGTLATDDTTVEVTDVQIEGDVVLHHTDDDPGKGEFVRG
QLDVERRRRLMRHHTATHVIGHAIRTVLGDHIRQAGASKGVDRSRLDVTHYERITREEVK
QIERVANELVMRNIPVKQEWPDRRDAEKKHGFDLYQGGIPPGEKIRLIHVGSDVQACGGT
HVKRTGDIGAIKVLTTEPVQDGVERVVFAAGNAAIEATQRTEDALYEAGEVLDVNPSDVP
ETAERFFTEWKERGKTIDRLKTELAEARAAAGADEIDIEGTPAVIQRLDSDADELRATAN
ALVEEGTVAVLGSAAGGSAQFVVGVPDGVGINAGQVVGELASKVGGGGGGPADFAQGGGP
NVDALDDVLDEAPDVLRTVLNA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactcgaatcggagtaccgcctcgactatttcgaggaggagggcttctaccgg
aagcagtgccccgtgacgggcgtacacttctggacacgtgaccctgaccgagagacctgc
ggcgaaccgccggcggatgactacaccttcatcgacaaccccggattcgacgaggagtac
acgctggaggagatgcgcgagaagttcctctcgtttttcgaggaacacgaccacgagcgt
atcgaaccgtatccggtcgctgcgaaccgctggcgcgacgacgtgctcttgacgcaggca
tctatctacgacttccagccgctcgtcacgtccggcgagacgccgccgccggcgaatccg
ctcaccatctcgcagccctgtatccgcatgcaggacatcgacaacgtgggcaagaccggt
cgtcacacgatggccttcgagatgatggcgcaccacgccttcaacgcccgcgaggaggcg
ggcgacaagtacgcctacgagggcgaagtctactggaaggacgagacggtccgactctgt
gacgagttcttcgagtcactcggcgctgacatctccgaaatcacctacatcgaagacccg
tgggtcggcggcggcaacgccggtcccgccttcgaggtactctaccgcggcgcggaactc
gcgaccctcgtcttcatgtcgatgaagcaggaccccgacggcgagtacgaactcaaggac
ggcaactcctactcgccgatggacacctacatcgtcgacaccggctacggactcgaacgg
tggacgtgggtgtcgcaggggaccccgacggtctacgaggccgtctaccccgacatgatc
gacttcctcaaggagaacgtcggcatcgaacacaccgacgacgaagaggaactcatccac
cgcgcggcaaagctctcgggccacctcgacatcgacgaaatcgacgacctcgcaaccgcc
cgcgccgaagtcgccgacgaactcggtgtcgacactcagagactcacctcgctgctccgc
ccgctcgaagacatctacgccatcgccgaccactgccgtaccctcgcgtacatgttcggc
gacggtattgtcccctcgaacgtcgggacgggctacctcgctcgcatggtgctccgccgc
accaagcgcctcgtcgacaacctcggcgtggacgcgccactcgacgaactcgtggacatg
caggccgagcggttggactaccagaaccgcgacaccatccgcgacatcgtccgcagtgaa
gagcggaagtaccgcaagacgctcgaacgcggctctcggaaggtccagcaactcgccgac
gactacgccgagacgggcgaacccatcccggtctccgaactcatcgaactgtacgactcc
cacggcatccaacccgacatggtgcaggagattgccgaggagcgcggcgcgacagtcgac
atccccgacgacttctactcgctcgtcgccgaccgacacgagcaggtcgacgccgaaacc
gccgcggagggccacgacgagcgcctcggcgacctgcctgcgacggacaaactctactac
gacgaccaggagcgaaccgagttcgaagcggtcgtcctcgacgtgttcgagcgcgaggag
ggctacgacgtggtcctcgaccagacgatgttctaccccgaaggcggcggccaacccgcc
gaccacgggacgctcgcaaccgacgacacgacggtcgaagtgaccgacgtgcaaatcgag
ggtgacgtcgtcctccaccataccgacgacgaccccggaaagggcgaattcgtccgcggt
caactcgacgtagagcgtcgtcgccgtctcatgcgacaccacacggcgacacacgtcatc
ggccacgctatccgcacggtcctcggcgaccacattcggcaggccggtgcctcgaagggc
gtcgaccgctctcgcctcgacgtgacgcactacgagcgcatcacccgtgaggaggtcaag
caaatcgagcgcgtcgccaacgaactcgtgatgcgaaacatcccggtcaaacaggagtgg
ccggaccgccgcgacgccgagaagaaacacggcttcgacctctatcagggagggattccg
ccgggcgaaaagattcgccttatccacgtcggcagcgacgtgcaggcctgcggtggcacc
cacgtcaagcgaaccggcgacatcggcgcaatcaaagtgctgacgactgagccagtccaa
gacggcgtcgagcgtgtcgtgtttgccgccggcaacgcggctatcgaggccacccagcgc
accgaagacgcgctctacgaggccggcgaagtcctcgacgtgaacccctcggacgtgccc
gagacggccgagcgcttctttaccgagtggaaagaacgcggcaagaccatcgaccgcctg
aagacggaactcgccgaggcgcgcgccgccgcgggtgctgacgaaatcgatatcgagggc
acgcccgccgtgattcagcgactcgacagtgacgcggacgaactccgcgcaaccgcaaat
gcgctggtcgaagagggcacagtcgctgtgctcggctccgccgccggtggcagcgcccag
ttcgtcgtcggcgtccccgacggcgtcggcatcaacgccggacaggtcgtcggcgaactc
gccagcaaggtcggcggcggcggtggcggcccggccgacttcgcgcagggcggcggtccc
aacgtggacgcacttgacgacgtgctcgacgaggctcccgacgtactgcggaccgtgctg
aacgcctaa
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