Haloferax mediterranei: HFX_5130
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Entry
HFX_5130 CDS
T02129
Symbol
boa
Name
(GenBank) bacterio-opsin activator-like protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hme03000
]
HFX_5130 (boa)
Transcription factors [BR:
hme03000
]
Prokaryotic type
Helix-turn-helix
Other families
HFX_5130 (boa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
GAF_2
GAF_3
Phage_integrase
HTH_20
Sigma70_r4
GAF
GerE
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AFK20964
UniProt:
I3R9Q4
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All DBs
Position
pHM300:142522..144288
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AA seq
588 aa
AA seq
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MGRSESGTTWLTAGDYERLRRATETYREDLVLRLGAEVGLKPVEMSQLKPAHITRRTHRG
TDLYLLTVPADGRDAHLPSDVEHDIRKYVRANDTGETERVLPVTPRRLQMLVSSIGERAA
EKTSHEGLADISTRDLRRYFARTLLSDGVHPSVVMSIGGWDRIESLAPLLDDPDEDTILD
AFSPEPDESNGHSDRGGTDRLQQVVETVRSVGSALPSVSTRSEVEQTVCDRFSDSEHYQF
AWIESDENDARVSLAAAAGLDEASLEAVRQSLSSRGTDYAERACHNRAVQTTTAVDLPTG
TANGAVTIVPLLHGETAYGALYLALDRANVTDSEKDVLLTLGRHIGQAITAVERRKLLLA
DTVVQLEFQCSDDDDLLVRLSADLGCTVRLRGVVPIEEQSLLCFLTVRGVTTDAVFDELV
TAAEVENIRLIRDRGEESLLEVALSAGSTITTLTSYDGTVSRFVAEDGVARFASEFSNET
PLRDVMADLTDAYPDTELVAKHEVERPARNTADFRESLATRLTDKQQSVLRAAYLAGYFE
WPRGSTAEDLADSIDISSPTLHQHLRTAQQKLLTSFFDDDEPETEPRP
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtagtgagtccggtacaacgtggttgactgcgggggactacgagcgactgcgg
cgggcaaccgagacgtaccgggaggacctcgtgctccgattaggcgcggaagtcggtctc
aaaccggtcgagatgagccaactcaaacccgcacacatcacccggcggacacaccgggga
acagacctgtatctactcactgtaccggccgacggccgagacgcgcacctgccgagcgac
gtcgaacacgacattcggaagtacgtcagagccaacgacactggcgagacggagcgagtg
ctccccgtcacgccacggcgtctgcagatgctcgtctcttcgattggcgagcgggccgcc
gaaaagaccagtcacgagggccttgcggacatctcgacgcgcgacctccgacgctacttc
gcccgaacactgctctctgacggcgttcacccgtccgtagtcatgagcatcggcgggtgg
gaccggatagagagtctcgctccgcttctcgacgacccagatgaggacacaatactggac
gcgttttcgccggagcccgacgagagtaacggacattccgaccgtggtgggacggaccgg
ttacagcaagtcgtagagactgttcgaagcgttggttcggcgctcccgtcggtgagcacg
cgtagcgaagtcgaacagacggtctgtgaccgattcagtgactcggagcactatcagttc
gcctggatagagtcggacgaaaacgatgcgcgggtgtcgctcgctgccgccgccggcctc
gacgaggcgtcactcgaagcagtccgtcagtcactctccagtcggggcacggattacgcc
gagcgtgcatgccacaaccgtgctgtacagacgactacagctgttgacctgcctacggga
accgcaaacggggcagttaccattgtcccgctgctacacggcgagactgcgtacggtgcc
ctctatctcgccctcgaccgggcaaacgtgactgactccgagaaagacgtgttgttgacg
ctggggcgtcacattgggcaggctatcaccgccgtagagcgaaggaagctactcctggcc
gatacggtcgttcaactggagtttcagtgctccgacgacgacgacctgctggttcgactc
tctgctgacctcggttgtacggttcgccttcgcggggtcgtccccatcgaagaacagtcc
ttgctgtgtttcctcaccgtacgaggcgtgacgaccgacgcggtgttcgacgagttggtc
acagcagcggaagtcgaaaacatccgtctgattcgtgaccggggcgaggagtcgcttctc
gaagttgcactctcagccgggtcgacgattacgacgctcacctcctacgacggcaccgtt
tcgcgattcgtcgcggaggatggcgtcgcccgtttcgccagtgagttttctaacgaaacg
ccacttcgagatgtgatggccgacctcaccgacgcgtaccccgacaccgaactcgtggcc
aaacacgaggtcgaacgtcccgcacgcaacacggccgactttcgagagtcgctggcgacg
cgactcaccgacaagcagcaatcggtcttgcgggcggcctatcttgcgggctacttcgag
tggccgcgcggcagtaccgctgaagacctcgccgattctatcgatatctcctcaccaacc
ctgcatcaacacctccgaactgcccagcagaagctcctaacgtcctttttcgacgacgac
gagccggaaaccgaaccccgaccctag
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