Hydra vulgaris (swiftwater hydra): 100212183
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Entry
100212183 CDS
T01080
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100212183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hmg04040
]
100212183
Ion channels [BR:
hmg04040
]
Ligand-gated channels
GABA-A
100212183
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
100212183
NCBI-ProteinID:
XP_012560049
UniProt:
A0A8B7DPE2
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Position
7:complement(53894196..53916536)
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AA seq
479 aa
AA seq
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MIFFIRTHALFHILVVLNIIPGSICINHEKDLRDEDVDKTWKVLMNGYDKAIRPNYTGDA
TMINLDMTVMRFGKLDEVNMMFTLDLFLRQEWIDYRLRHNLPEILTPNLGHDSPPDFIWT
PDTVFLNAQKASSHSVTVKNSKLDIYPDGKVFWGLRVSVEANCLFDLRNYPMDTQACDLG
IVSYGYTIDHLLYRWRNDPIQILNQNLSQYTLTGIENKTIVEQFSMGKFALLKAEFTFKR
RIAFSILQIFFPCVAIVCVSWISLWLHKHCSPARVGIGVTTLLTISTIWGSVNRRLPNVS
YVKAVDIYFMASFSFIFMTLIEYTIVLNGLKNFKKKFVMKNAYKEISKLSKRVSISLSID
KVKMPNMRRYSEPCRSSTSIIARYQRKSENSFLLDDANLSCNQISQKFYEEEFSEEEDIL
LLSKKEVAEKHPAFMKLYLELRKASIVDKISRILFPLLFICFNIFYWLKYNDNASPNKN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgattttctttattaggacacatgcactatttcatatattggtcgtattaaatattatt
cctggaagcatctgtattaatcatgaaaaggatttgagagatgaagatgttgataaaact
tggaaagttcttatgaatggttacgacaaagctatcagaccaaattacacaggagatgcg
accatgattaacttagatatgacagttatgagatttggaaaactagatgaagtcaacatg
atgtttacgttagatttattcttacgccaagaatggatagactaccgtctacgtcacaac
ttaccagaaattctaacaccaaatcttggtcatgatagccctccagatttcatttggaca
ccagatactgtttttttaaatgctcaaaaagcatcaagtcacagtgttacggtaaaaaac
tcgaagttagacatctatcctgatggaaaagtattttggggtttaagagtgagtgttgaa
gcgaactgtttatttgatcttcgaaattatccaatggacacacaagcatgcgaccttggg
attgtaagctatgggtacactatagaccacttactctacagatggcgtaatgaccctata
caaattcttaatcaaaatctctcacagtacacacttactggaatagaaaataaaaccatt
gtcgaacaattttcaatgggaaagtttgctctcttgaaggctgagtttacatttaaacga
agaatcgcttttagcattttacaaatatttttcccttgcgtagcgattgtttgtgtatct
tggatttcactttggttacataaacattgttcccctgctagagttggaatcggtgttaca
actttgctgacaatcagcaccatttggggatccgtaaaccgccgcttacctaacgtcagt
tacgtaaaagctgtagatatttattttatggcttctttttcgtttatctttatgactctt
atagagtacacaattgttcttaatggtttaaaaaacttcaagaaaaagtttgtcatgaaa
aatgcatataaggaaatcagcaaactgtcaaaaagagtttctataagtctttcgattgat
aaagttaaaatgcctaacatgcggagatattcggaaccgtgccgatcttcaacttccata
attgcaagatatcaacgaaaatcagaaaattcgtttttattagatgatgctaatcttagt
tgtaatcagatttcgcaaaagttttacgaggaagaattttcagaagaagaagatattctg
cttttaagtaaaaaagaggttgctgaaaaacatccggcttttatgaagttgtatctcgaa
ctcaggaaagcttcaatagttgataaaattagtcgcatcctgttcccactgttgttcata
tgttttaacattttttactggcttaaatataatgataatgcatcgccaaacaaaaattag
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