Halomicrobium mukohataei: Hmuk_0318
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Entry
Hmuk_0318 CDS
T00982
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
hmu
Halomicrobium mukohataei
Pathway
hmu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hmuk_0318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmu03400
]
Hmuk_0318
DNA repair and recombination proteins [BR:
hmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hmuk_0318
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Hmuk_0318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
DnaJ_CXXCXGXG
AAA_23
RsgA_GTPase
AAA_15
ATPase
Zn-ribbon_8
BCA_ABC_TP_C
CA109-like
Motif
Other DBs
NCBI-ProteinID:
ACV46455
UniProt:
C7NX90
LinkDB
All DBs
Position
306747..309767
Genome browser
AA seq
1006 aa
AA seq
DB search
MTREYIEVRGAEEHNLKDIDVEIPREELTVVTGLSGSGKSSLAFETVYAEGQRRYIESLS
AYARNFLGQMDKPQVETVEGLSPAISIDQKNAANNPRSTVGTVTELHDYLRLLYARIGTP
HCPECGREVGEQSAQNMVRRMLALPEGTRAKIAAPVVRDQKGAFEELFEELVSEGYARVE
VDGEPYDLTIDDPDLDENYDHTIDVIVDRVSVSADARSRITDSVETALEEGAGITKVILP
DPPEGVSLGGATARSTGDLAGTGDSDDHSDRERLVVEFSEELACTHCGIDISEIETRSFS
FNSPHGACPECEGLGETKEVSEELVIQDRSKPLKHVFEPWSYDRTYYSRQLDNVADHFGV
SLETPFEELDESIQHQFLYGTDDLVHFEWQTKNGTREKTERFEGVVPNLERRHVETDSDR
AREHIEEFMAVTTCPECEGTRLKAESRHVLVDGSSASDASGTSSEVSSDGTSITEVNRMS
IGDALEHFEGLEASLDERDTKIAEEILKEIRARLGFMEEVGLEYLTLDREASTLSGGESQ
RIRLATQIGSGLVGVLYVLDEPSIGLHQRDNDRLLNTLAELRDLGNTLLVVEHDEETMRR
ADNIIDMGPGPGKRGGEVVVNGDMDEVIDCEDSVTGEYLSGERTIPVPDDRRASDTHLTI
EGARQHNLADLDVDLPIGCFTAITGVSGSGKSTLMHDVLYKGLVRRMNDTDVNPGEHDGI
EGIDEIETVRLIDQSPIGRTPRSNPATYTNVFDHIRELFAETNLSKQRGYEKGRFSFNVK
GGRCEACGGQGNVKIEMNFLSDVYVPCEECDGARYNDETLDVTYKDATISDVLDMSVAEA
YDFFEGHTGIRRRLKLLKDVGLDYMRLGQPSTTLSGGEAQRIKLAEELGKKDSGETLYLL
DEPTTGLHPEDERKLIDVLHRLTDEGNTVVVIEHELDLVKNADHIVDLGPEGGEHGGTIV
AEGTPEDVARNEESYTGQYLRDLLPKVDLEGPRADRDVAQPAADDD
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgacacgagagtacatcgaggtccgcggtgcggaggaacacaacctcaaggacatcgat
gttgagatcccgcgagaggagttgacggtcgtgacggggctgtcgggatcgggcaagtcc
tcgctggccttcgagacggtgtacgctgagggacagcgccgctacatcgagtcgctgtcg
gcctacgccagaaacttcctgggccagatggacaagccacaggtcgagaccgtcgagggg
ctgagcccggcgatctcgatcgaccagaagaacgccgccaacaacccccgatcgacggtc
gggaccgtcacggaactccacgactacctgcgcctgctgtacgcccgaatcgggacgcca
cactgtccggagtgtggccgcgaggtcggcgagcagtccgcccagaacatggtccgtcgg
atgctggccctgcccgaggggacccgcgcgaagatcgccgcaccggtcgtacgcgaccag
aagggtgccttcgaggagctgttcgaggagctggtgagcgaggggtacgcccgcgtcgag
gtcgacggcgaaccgtacgacctgacgatcgacgaccccgatctcgacgagaactacgac
cacacgatcgacgtgatcgtcgaccgcgtgagcgtcagcgcggacgcccgctcgcggatc
accgactccgtcgagacggccctcgaagaaggggcgggcatcacgaaggtgatcctcccg
gacccgccggaaggcgtgtccctcggcggggcgacggcgcgctcgacgggcgatctcgcg
gggaccggcgacagcgacgaccacagcgaccgcgagcggctcgtcgtcgagttctccgag
gagctcgcgtgtacccactgcgggatcgacatctccgagatcgagacccgctcgttctcg
ttcaacagcccccacggggcctgtccggagtgtgagggcctcggcgagaccaaggaggtc
agcgaggagctcgtcatccaggaccgttcgaagcccctcaagcacgtcttcgaaccctgg
agctacgaccgcacctactactcgcgacagctggacaacgtcgcggaccacttcggcgtc
tcgctggagacgcccttcgaggagctggacgagtcgatccagcaccagttcctctatggc
acggacgacctcgttcacttcgagtggcagaccaagaacggcacccgcgagaagaccgag
cgcttcgagggcgtcgtcccgaacctggaacgtcgccacgtcgagaccgacagcgaccgc
gcccgcgaacacatcgaggagttcatggccgtcaccacctgtcccgagtgtgagggcacc
cgcctgaaagcggagtcccgtcacgtcctcgtcgacgggagttccgcgagcgatgcgagc
ggaacgtcgtcggaggtttcctccgacggtacgtcgatcaccgaggtcaaccggatgtcg
atcggcgacgcactggaacacttcgaggggctggaagcgtcgctggacgaacgcgacacg
aagatcgccgaggagatcctcaaggagatccgcgcccgcctcgggttcatggaggaggtc
gggctggagtatctcaccctcgaccgggaggcgtcgacgctgtccggcggcgagagccag
cgcatccggctggcgacccagatcggctccggactggtcggcgtgttgtacgtgctcgac
gagccctcgatcggactccaccagcgggacaacgaccggctgttgaacacgctggctgag
ctgcgcgacctcggaaacacgctcctcgtcgtcgagcacgacgaggagacgatgcgccgg
gccgacaacatcatcgacatgggtcccggccccggcaaacggggcggcgaagtcgtcgtc
aacggcgacatggacgaggtgatcgactgcgaggacagcgtcaccggcgagtacctctcg
ggcgagcggacgatcccggtccccgacgaccgccgagcgtcggacacccacctcacgatc
gagggggcacgccagcacaacctcgcagatctggacgtggaccttccgatcggctgtttc
accgcgatcacgggcgtctctgggtcgggcaagtcgacgctgatgcacgacgtgctgtac
aagggcctcgtccggcggatgaacgacaccgacgtgaaccccggcgagcacgacggcatc
gaggggatcgacgagatcgagaccgtccgcctcatcgaccagtcgcccatcggccgcacg
ccgcgctcgaacccggcgacctacacgaacgtcttcgatcacatccgcgagctgttcgcc
gagacgaacctctcgaagcagcgcggctacgagaagggacgcttctcgttcaacgtcaag
ggcggtcgctgcgaggcctgtggcggccagggcaacgtcaaaatcgagatgaacttcctc
tctgacgtgtacgtcccctgcgaggagtgcgacggggcgcggtacaacgacgagacgctg
gatgtcacctacaaggacgccaccatctccgacgtgctggacatgagcgtcgcagaggcc
tacgacttcttcgagggccacaccggtatccgccgccgcctgaagctcctgaaagacgtg
ggtctggactacatgcggctgggccagccctcgacgacgctctccggcggagaggcccag
cggatcaagctcgccgaggaactggggaagaaagactccggcgagacgctgtacctgctc
gacgagcccacgaccgggctccaccccgaggacgagcgcaagctgatcgacgtgctccac
cgcctgaccgacgagggcaacacagtcgtcgtcatcgagcacgaactcgatctggtgaag
aacgccgaccacatcgtcgacctcggacccgagggcggcgagcacggcgggaccatcgtc
gccgaaggcacgcccgaggacgtggcccgaaacgaggagtcctacacggggcagtacctc
cgcgatctgctgccgaaagtggatctggaggggccacgcgccgaccgcgacgtggcacag
ccagcggcggacgacgactga
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