Hyphomonas neptunium: HNE_0920
Help
Entry
HNE_0920 CDS
T00397
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hne
Hyphomonas neptunium
Pathway
hne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HNE_0920 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_0920 (xseA)
Enzymes [BR:
hne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HNE_0920 (xseA)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HNE_0920 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
ROXA-like_wH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ABI75677
UniProt:
Q0C3P6
LinkDB
All DBs
Position
complement(937061..938488)
Genome browser
AA seq
475 aa
AA seq
DB search
MGQPVQNQPMPDSPTTNHPELTVSELAASLKRTIETNYDQVTVRGELGRVTIAKSGHMYA
DLKDDKAVLNTIMWRGQVDRLTFRPEEGLEVVATGRLSTYEGRSAYQMIASTMRPAGAGA
LMQLLEERKKKLAAEGLFDQAHKKPIPYMPRTIGVITSPTGAVIRDILHRIRERFPVRVI
VWPALVQGEQAASQVTAGIRGFNAMTGADRPDVLIVARGGGSIEDLWPFNEEVVVRAAFE
SEIPLISAVGHETDTTLIDYVSDRRAPTPTGAAEIAVPVRTELMLGIEESGQRLKRALTR
ALSRSRDKLAAARLPRPESLLQSKRQRLDFASASLPRAALALTQRARLKLSRLQLSPATL
KAEIRGQRQRLRDTAVRARPALMRLIDQKKAALTSEGKLLETLSYQATLKRGYVIVRDTG
GQLVRNAAQAQTLDTLRVTFADGDITAAPFEGETPPPAPKPKPAPRRKGEQGNLF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggccagccggtccagaaccagcccatgcctgactcgcccacgaccaatcaccctgag
ctcaccgtttcggaactcgccgcgagcctgaagcggacgattgagaccaattacgatcag
gtgaccgtgcgcggcgaacttggccgggtgacgattgccaaatccggccacatgtatgcc
gacctaaaggacgacaaggcggtgctcaacaccatcatgtggcgcgggcaggtcgaccgg
ctgaccttccggcctgaggaaggcctggaagtggtcgccacagggcgcctctccacctat
gagggccgctccgcctatcagatgatcgccagcacgatgcggcccgccggggcgggcgcg
ctgatgcagctgctagaagagcgcaagaaaaagctcgcggcggagggcctgttcgatcag
gcccacaagaagccgatcccctatatgccgcgcaccatcggggtgatcacttcccccact
ggcgcggtgatccgggacattctgcaccggattcgcgagcggtttcccgtccgcgtcatc
gtctggccggctctggttcagggcgagcaggcggcaagccaagtgactgccggcatccgg
gggttcaacgcgatgacgggggcggatcggcccgatgtgctgatcgtggcgcggggcggc
gggtcgattgaagacctttggccgttcaatgaggaggtggtcgtgcgggccgctttcgag
agtgaaatccctttgatttcagcggttgggcacgagaccgataccacgctgatcgattac
gtttccgaccggcgggcgccgacgcccacaggcgcagccgagatcgccgtgccggtgcgc
accgagctgatgctcggcattgaggaatccggccagcgcctgaaacgcgccctcacccgc
gccctttcccggtcccgcgacaagctggccgccgcgcgcctgccccggccagaaagcctt
ttgcaatcaaagcgccagcggctggacttcgcctccgccagcctgccccgcgcggccctg
gcgctgacccagcgggcgcgcctcaaactctcccgcctgcagttgtcaccggccacgctg
aaggcggaaatccgcggccagcgccagcgtctgcgcgacaccgccgtgcgcgcgcggccg
gccctgatgcgcctgatcgaccagaagaaggcagcgctgacctccgaaggcaaactgctc
gaaaccctgtcctatcaggccacgctgaaacgcggctatgtgatcgtgcgcgacactggc
gggcaattggtgcgcaacgccgcgcaggcgcagaccctcgacacgctgcgcgtgaccttt
gctgacggcgatattacggccgccccctttgaaggcgaaacgcccccgccggcccccaaa
cccaagcccgccccccgccggaaaggggagcagggcaacctgttctga
DBGET
integrated database retrieval system