KEGG   Hyphomicrobium nitrativorans: W911_09325
Entry
W911_09325        CDS       T02943                                 
Name
(GenBank) hypothetical protein
  KO
K21470  L,D-transpeptidase YcbB
Organism
hni  Hyphomicrobium nitrativorans
Brite
KEGG Orthology (KO) [BR:hni00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:hni01002]
    W911_09325
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hni01011]
    W911_09325
Peptidases and inhibitors [BR:hni01002]
 Cysteine peptidases
  Family C82
   W911_09325
Peptidoglycan biosynthesis and degradation proteins [BR:hni01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   W911_09325
SSDB
Motif
Pfam: YkuD PG_binding_1
Other DBs
NCBI-ProteinID: AHB48545
UniProt: V5SER3
LinkDB
Position
1934812..1936095
AA seq 427 aa
MAISMQAIRGRRCLRFGAAVLGSIVSAGAASADDFWTLQFGPTGGGYSAVSERQALRELE
RNPEPGLPTLSPANVKATRDAIQRYTEIVQAGGWPTLPGEQVKPGEQSFAVVMLRDRLAI
SGELAAGGSRSDVLDGTLVEALKVYQSTNGLTPNGRLDRATIAALNVSAEDRLKQLKTNL
SRLSTLTQTTKSHRRYVVVNVPSAQVEAVALNRVISRHTAVVGMKDRPTPVLRSNIYEMN
FNPIWRLPPTVIREDLIPQARAAQAKGENLLVKTGINAYDGNGRKLDPAKIDWSSAAPRG
YSYRQPAGKDNPLGFVKINFANSESVYMHDSPTDGLFGQNIRAASSGCIRVHNIERLAYW
LLGQNDGWDQARVEKMKETGERADVRLASQVPLHFAYITAWATEDGTIQFRRDLYNRDGV
AEIATSY
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcgatatcgatgcaagctatccggggcaggcgctgcctgcggttcggtgcggccgtc
ctcgggtcgattgtctcggctggtgccgcgtccgcggacgacttctggacgctgcagttc
gggccaaccgggggcggctatagcgccgtgtccgagcgccaggcgctgcgcgaattggag
cgcaaccccgagccggggctgcccacgctctcgcccgcgaacgtcaaagcgacgcgggat
gcgatccagcgctatacggagatcgttcaggcgggcggctggcccacgctgccgggcgag
caggtgaagcccggagagcagagcttcgccgtcgtgatgctgcgcgaccggcttgcgatc
tcgggcgaactcgcggcgggcgggagccggagcgatgtgctcgacggcacgctcgtcgaa
gctctcaaagtctatcagtccacgaacgggctgacacccaatgggcggctcgacagggcg
acgattgctgcgctcaacgtttcggccgaggatcgcctcaagcagctcaagaccaatctc
tcgcgcctttcgacgctgacgcagacgacgaaatcgcatcggcgttatgtcgtggtcaac
gttccgtccgcacaggtggaggcggtggcgcttaaccgcgtcatctcgcggcatacggcg
gtggtcggcatgaaggaccggccgacgccggttctgcgctccaacatctacgagatgaac
ttcaatccgatctggcggctgccgccgaccgtgatccgcgaggatctgattccgcaggcg
cgcgcggcccaggccaagggcgagaacctgctcgtcaagaccggcatcaacgcctacgac
ggaaacgggcgcaagctcgacccggcgaagatcgactggagcagcgccgctccgcgcggc
tactcgtatcgtcagcccgcgggcaaagataacccgctcggcttcgtgaagatcaacttc
gccaacagcgagtccgtctacatgcacgacagcccgacggacggtctcttcgggcagaat
atccgagcggccagctcgggctgcattcgcgtccacaacatcgagcggctggcctattgg
cttttgggccagaacgacggctgggatcaggcccgcgtcgaaaagatgaaggaaaccggc
gagcgggcggacgtgcgactcgccagccaggtgccgctgcatttcgcctatatcaccgcc
tgggcgaccgaggacggcacgatccagttccgccgcgacctctacaatcgcgacggtgtg
gcggagatcgcaacgtcctattga

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