Hyphomicrobium nitrativorans: W911_09325
Help
Entry
W911_09325 CDS
T02943
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hni
Hyphomicrobium nitrativorans
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hni01002
]
W911_09325
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hni01011
]
W911_09325
Peptidases and inhibitors [BR:
hni01002
]
Cysteine peptidases
Family C82
W911_09325
Peptidoglycan biosynthesis and degradation proteins [BR:
hni01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
W911_09325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AHB48545
UniProt:
V5SER3
LinkDB
All DBs
Position
1934812..1936095
Genome browser
AA seq
427 aa
AA seq
DB search
MAISMQAIRGRRCLRFGAAVLGSIVSAGAASADDFWTLQFGPTGGGYSAVSERQALRELE
RNPEPGLPTLSPANVKATRDAIQRYTEIVQAGGWPTLPGEQVKPGEQSFAVVMLRDRLAI
SGELAAGGSRSDVLDGTLVEALKVYQSTNGLTPNGRLDRATIAALNVSAEDRLKQLKTNL
SRLSTLTQTTKSHRRYVVVNVPSAQVEAVALNRVISRHTAVVGMKDRPTPVLRSNIYEMN
FNPIWRLPPTVIREDLIPQARAAQAKGENLLVKTGINAYDGNGRKLDPAKIDWSSAAPRG
YSYRQPAGKDNPLGFVKINFANSESVYMHDSPTDGLFGQNIRAASSGCIRVHNIERLAYW
LLGQNDGWDQARVEKMKETGERADVRLASQVPLHFAYITAWATEDGTIQFRRDLYNRDGV
AEIATSY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatcgatgcaagctatccggggcaggcgctgcctgcggttcggtgcggccgtc
ctcgggtcgattgtctcggctggtgccgcgtccgcggacgacttctggacgctgcagttc
gggccaaccgggggcggctatagcgccgtgtccgagcgccaggcgctgcgcgaattggag
cgcaaccccgagccggggctgcccacgctctcgcccgcgaacgtcaaagcgacgcgggat
gcgatccagcgctatacggagatcgttcaggcgggcggctggcccacgctgccgggcgag
caggtgaagcccggagagcagagcttcgccgtcgtgatgctgcgcgaccggcttgcgatc
tcgggcgaactcgcggcgggcgggagccggagcgatgtgctcgacggcacgctcgtcgaa
gctctcaaagtctatcagtccacgaacgggctgacacccaatgggcggctcgacagggcg
acgattgctgcgctcaacgtttcggccgaggatcgcctcaagcagctcaagaccaatctc
tcgcgcctttcgacgctgacgcagacgacgaaatcgcatcggcgttatgtcgtggtcaac
gttccgtccgcacaggtggaggcggtggcgcttaaccgcgtcatctcgcggcatacggcg
gtggtcggcatgaaggaccggccgacgccggttctgcgctccaacatctacgagatgaac
ttcaatccgatctggcggctgccgccgaccgtgatccgcgaggatctgattccgcaggcg
cgcgcggcccaggccaagggcgagaacctgctcgtcaagaccggcatcaacgcctacgac
ggaaacgggcgcaagctcgacccggcgaagatcgactggagcagcgccgctccgcgcggc
tactcgtatcgtcagcccgcgggcaaagataacccgctcggcttcgtgaagatcaacttc
gccaacagcgagtccgtctacatgcacgacagcccgacggacggtctcttcgggcagaat
atccgagcggccagctcgggctgcattcgcgtccacaacatcgagcggctggcctattgg
cttttgggccagaacgacggctgggatcaggcccgcgtcgaaaagatgaaggaaaccggc
gagcgggcggacgtgcgactcgccagccaggtgccgctgcatttcgcctatatcaccgcc
tgggcgaccgaggacggcacgatccagttccgccgcgacctctacaatcgcgacggtgtg
gcggagatcgcaacgtcctattga
DBGET
integrated database retrieval system