Haliangium ochraceum: Hoch_4167
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Entry
Hoch_4167 CDS
T01103
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoh03021
]
Hoch_4167
Transcription machinery [BR:
hoh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Hoch_4167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
FkbO_Hyg5-like_N
Motif
Other DBs
NCBI-ProteinID:
ACY16665
UniProt:
D0LKU5
LinkDB
All DBs
Position
complement(5740732..5741349)
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AA seq
205 aa
AA seq
DB search
MTTLATTQKELAARPQTRRHPPLETEAAIIAGCRRGEKRAREALYHQYKRRVFGLVTRIV
GPGEAEEVAQDAFVRIFRGIPKFRGDSALGTWIYRLAVNAALTHATRRKRHFHAGDEVLA
EVAAPAQVSRDPNLAARLERALAELPPGYRAIMVLHDIEGLSHEECANILGCRVGTSKSQ
LHKARARMRTLLGPELAAERGHQER
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgaccactctcgcaacgacccaaaaggaactcgccgcccggccgcagacccgacggcat
cccccgctggagaccgaggccgcgatcatcgccggctgccgccgcggtgagaagcgcgcc
cgcgaagcgctctaccaccagtacaagcgccgcgtcttcggcctggtgactcgcatcgtc
ggtcccggcgaggccgaggaggtcgcccaggacgcgttcgtgcgcatcttccgcggcatc
cccaagttccgcggcgactccgccctgggcacgtggatctaccgcctggccgtcaacgcc
gcgctcactcacgcgacccggcgcaagcgtcacttccacgccggcgacgaggtcctggcc
gaggtcgcggcgccggcgcaggtgtcgcgcgatcccaacctcgccgcccggctcgagcgg
gcgctggccgagctgcccccgggctatcgcgccatcatggtgctgcacgacatcgagggc
ctgtcgcacgaggagtgcgccaacatcctcggctgtcgcgtgggcacatccaagtcgcag
cttcacaaggcgcgggcgcgcatgcgcaccctgctcggtcccgagctggcggccgagcgc
ggccaccaggagcggtga
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