KEGG   Halothermothrix orenii: Hore_03420Help
Entry
Hore_03420        CDS       T00838                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
hor  Halothermothrix orenii
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hor00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Hore_03420
Enzymes [BR:hor01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Hore_03420
DNA repair and recombination proteins [BR:hor03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Hore_03420
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
complement(355638..356495)
Genome map
AA seq 285 aa AA seqDB search
MLLFEIEKPFNSPDYIFELKWDGYRALAFINDNNLLLQSRNQKNLTPYFSELKSITSLFK
GTNAVLDGEICYLNRDGKPVFEKLQGRIWQKKSNIKYPVTYITWDILGLNNNDLTRTPLL
ERKKILQNYIQESNRLKRSKYIKEKGKELYEMAEEEGLEGIVAKKVNSPYEFKRSKYWYK
IKIWQYTTAVIVGFTRDKEALLVGKYLKDNNKISFMGRVKIALNEAEKKALFRFLPTLKV
KKPPFKVRHKQGISWVKPAIQCKVKYTEITSNNTFRHGFVVKLKI
NT seq 858 nt NT seq  +upstreamnt  +downstreamnt
atgctcttatttgaaattgaaaaaccatttaattcccctgattacatttttgaactaaaa
tgggacggctaccgggccctggcatttattaatgataataacctcctcttacagagccgc
aaccaaaaaaacctgaccccatatttttctgaattaaagtcaataacctcattgttcaaa
ggaactaacgcagtccttgatggtgaaatatgctacctcaacagggatggaaaacctgtc
tttgaaaagctgcagggccgtatctggcagaaaaaaagtaatattaaatacccagtgaca
tatattacctgggatatcctgggtttaaataataatgatttaaccaggacaccccttctt
gaaagaaaaaaaatactgcagaattatattcaggaaagtaaccgcttaaaaaggtccaaa
tatataaaagaaaagggtaaagaattatatgaaatggccgaagaagaaggactggaggga
attgtcgccaaaaaggttaactctccctatgaatttaagcggagtaaatactggtacaaa
attaaaatctggcagtatacaacggctgtaattgtaggctttaccagggataaagaggct
ttattagtgggaaaatatttaaaagataataataaaatatcctttatgggcagggtaaaa
atagccctgaatgaagctgaaaaaaaggccttattccgttttttacctactctaaaagta
aaaaaacccccgtttaaagtcaggcataaacaggggatatcatgggtaaaaccggctatt
caatgtaaagttaagtatactgaaattaccagtaacaatactttccggcatggatttgtg
gttaaacttaaaatataa

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