Helicobacter pylori HPAG1: HPAG1_0807
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Entry
HPAG1_0807 CDS
T00365
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
hpa
Helicobacter pylori HPAG1
Pathway
hpa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPAG1_0807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpa03400
]
HPAG1_0807
DNA repair and recombination proteins [BR:
hpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPAG1_0807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
Mt_ATP-synt_D
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ABF84874
UniProt:
Q1CT48
LinkDB
All DBs
Position
841444..843228
Genome browser
AA seq
594 aa
AA seq
DB search
MADLLSSLKNLSHSSGVYQYFDKNRQLLYIGKAKNLKKRIKSYFSIHNNEITPNHRASLR
IQMMVKQIAFLETILVENEQDALILENSLIKQLKPKYNILLRDDKTYPYIYMDFSTDFPI
PLITRKILKQPGVKYFGPFTSGAKDILDSLYELLPLVQKKNCIKDKKACMFYQIERCKAP
CENKITKEEYSKIAKECLEMIENRDKLIKELELKMERLSNNLRFEEALIYRDRIAKIQKI
APFTCMDLAKLYDLDIFAFYGASNKAVLVKMFMRGGKIISSAFEKIHSLNGFDTDEAMKQ
AIINHYQSHLPLMPEQILLSACSNEALKELQEFISHQYSKKIALSIPKKGDKLALIEIAM
KNAQEIFSQEKTSDEDLILEEVRSLFNLECVPYRVEIFDTSHHSNSQCVGGMVVYENNAF
QKNSYRRYHLKGSNEYDQMSELLTRRALDFAKEPPPNLWVIDGGRAQLNIALEILKSSGS
FVEVIAISKEKRDSKAYRSKGGAKDIIHTPSDTFKLLPSDKRLQWVQKLRDESHRYAINF
HRSTKLKNMKQIALLKEKGIGEASVKKLLDYFGSFEAIEKASEQEKNAVLKKRI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttattgtccagtttgaaaaacctttctcatagcagtggggtgtatcaatat
tttgataaaaaccgccaattactctatatcggtaaggcgaaaaatttaaaaaagcgcatc
aaaagctatttttctatccataacaatgaaatcacgcccaaccatcgcgcaagcttacgc
atccaaatgatggtcaaacaaatcgcttttttagaaaccattttagtggaaaacgagcaa
gacgctttgattttggaaaattctttaatcaagcagctcaagcccaaatacaacattctt
ttaagagacgataaaacttacccttatatttacatggatttttccactgatttccctatc
cctttaatcacacgaaaaattttaaaacagcctggcgttaaatattttggcccttttacg
agcggggctaaggatattttggacagcttgtatgaattgctcccattagttcaaaagaaa
aattgcatcaaggataaaaaggcatgcatgttttatcaaatagagcgttgtaaagcccca
tgcgagaataaaatcaccaaagaagagtattcaaaaatcgctaaagaatgtttagaaatg
attgaaaatagagacaagctcatcaaggagcttgaattaaaaatggagcgcctttctaat
aacttgcgttttgaagaagccctaatttacagggacaggattgcaaaaatccaaaaaatc
gcccctttcacttgcatggatttagccaaactctatgatttggacatttttgctttttat
ggcgcaagcaataaggcggtgttggtgaaaatgtttatgcgtgggggtaaaatcatttct
tcagcgtttgaaaaaatccactcccttaatgggtttgacactgatgaagcgatgaaacaa
gccattatcaatcattaccaatcgcatttacctttgatgcctgaacagatcttgttgagc
gcttgctctaatgaagcgcttaaagaattgcaagaatttatctctcatcaatattctaaa
aaaatcgctcttagcattcctaaaaaaggcgataagctcgctttaatagaaatcgctatg
aaaaacgctcaagagatttttagccaagaaaaaacctctgatgaagatctgattttagaa
gaggtgcgatcgctctttaatttagagtgcgtgccttatagggtagaaatctttgacaca
agccaccattcaaacagccaatgcgtggggggaatggtcgtgtatgaaaacaatgcattt
caaaaaaactcttaccggcgctaccatttaaaaggctctaacgaatacgatcaaatgagc
gaattgctcaccagaagggctttagactttgctaaagagccaccgcctaatttgtgggtg
attgatggagggagggcacaattaaacatcgctttagaaattttaaaaagcagcgggagt
tttgtagaagtgatcgctatttctaaagaaaaaagggattctaaagcttatcgctctaaa
gggggcgctaaagacatcatccatacgcctagcgatacttttaaattgctccctagcgac
aaacgcttgcaatgggtgcaaaaattgcgcgatgaaagccaccggtatgcgataaacttc
cacagatccactaaacttaaaaacatgaaacaaatcgctcttttaaaagaaaagggcata
ggagaagccagcgtgaaaaaattattggattattttgggagttttgaagcgatagaaaaa
gcgagcgagcaggaaaaaaacgctgttttaaaaaaacgaatttaa
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