Glaesserella parasuis ZJ0906: K756_03545
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Entry
K756_03545 CDS
T02697
Name
(GenBank) cold-shock DEAD box protein A-like protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
hpaz
Glaesserella parasuis ZJ0906
Pathway
hpaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K756_03545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpaz03019
]
K756_03545
03009 Ribosome biogenesis [BR:
hpaz03009
]
K756_03545
Messenger RNA biogenesis [BR:
hpaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K756_03545
Ribosome biogenesis [BR:
hpaz03009
]
Prokaryotic type
rRNA helicases
K756_03545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
Septin
Motif
Other DBs
NCBI-GeneID:
16165586
NCBI-ProteinID:
AGO15930
UniProt:
A0A806JEG1
LinkDB
All DBs
Position
675182..676993
Genome browser
AA seq
603 aa
AA seq
DB search
MTETTLTFADLGLPQSILNSVNEMGFVTPSPIQQACIPHLLNGRDVLGMAQTGSGKTAAF
SLPILAQIDPEQRHPQMLVMAPTRELAIQVADACEQFSKNMKGIRTVTIYGGQRYDIQIR
ALKNGAQVVVGTPGRILDHIRRGTLDLSMLKAIVLDEADEMLRMGFIEDVETVMAELPED
HQTALFSATMPEPIRRITKRFMKDPQEVKIQATQRSAPDIAQSYWLVNGFRKNDALLRFL
EVEEFDAAIIFTRTKTGTIDIAELCERNGYRAAALNGDMTQQVREQALEKLKSGRLDVIV
ATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLKNI
EHLIKKPINEVPVPNHEILMEKRREKFKARISLQLEHHDLELYRELLEDLFTADQDHEEL
AAAMMMLLQEKQKLILPPDPEIRPSRAERGKGRENPRSAERRGGGREHRDNNGVAMDLYR
IELGREDGVEVRHIVGAIANEGDINSRYIGHIKLHDKYSTIELPQGMPKHLVQHFAQKAR
VLSKPMQMSFLGPVGSATNANPYEDKSGRGKGRGRDGRREERGFKDRKEGGFKEKRFNER
GRR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacaactttaactttcgccgatttaggcttaccacaatctatccttaattct
gtaaatgaaatgggttttgtaaccccatcaccgatccagcaagcctgtatcccacacctt
ttaaatggtcgtgatgtgttaggtatggcacaaacaggaagtggtaaaacagcggcattc
tctttgcctattttggctcaaattgatccagaacagcgtcacccacaaatgttggtgatg
gcaccaacccgtgaattagcaatccaagtggcagatgcttgtgagcagttcagcaagaat
atgaaaggtattcgcacggtcacgatttatggtggtcagcgttatgatattcaaatccgt
gctttaaaaaatggtgcgcaagttgtggtaggaacgccagggcgtattcttgaccatatt
cgccgtggtaccttagatctttctatgctaaaagcgattgtattagatgaagcagacgaa
atgttgcgtatgggctttatcgaagatgtcgaaacggttatggcggaactgcctgaagat
caccaaacagcacttttctctgccacaatgccagagccaattcgccgtattaccaaacgt
tttatgaaagatccgcaagaggttaaaattcaggcaacccaacgttctgcaccagatatt
gcacaaagctactggttagtgaacggcttccgtaaaaatgatgcgttattgcgtttctta
gaagtagaagagtttgatgcggcgattatctttactcgtaccaaaacgggcaccattgat
attgctgaactctgtgagcgtaatggctatcgtgcagccgcattaaacggtgatatgacc
caacaagtgcgtgaacaagcattggaaaaactaaaatcaggtcgtttagatgtgattgtg
gcaacggacgtggcggctcgtggtatcgacattgagcgtatcagtttggtagtaaactac
gacattccacttgacgcagaatcttatgttcaccgtatcggtcgtacaggtcgtgctggt
cgttcaggtcgtgcattattatttgtagagccgcgtgaacgtcgtttattgaaaaacatt
gaacacttaatcaagaagccgattaatgaagtgccagtaccaaatcacgaaattttaatg
gaaaaacgtcgtgagaaatttaaagcacgcatttcattacaattagaacatcacgattta
gagctttatcgtgaattattagaagatctattcacggcagaccaagatcacgaagaatta
gctgcagcaatgatgatgttgttgcaagaaaaacaaaaacttattcttccgccagatcct
gaaattcgcccttctcgtgctgagcgtggaaaaggacgtgaaaatccacgttctgcagaa
cgtcgtggtggcggtcgtgaacatcgtgataataacggtgtggcaatggatctttatcgt
atcgaacttggtcgtgaagatggtgttgaagtgcgtcacattgttggagcgattgccaac
gaaggcgatattaacagccgttatatcggacatatcaagttacacgataaatactcaacc
attgaattaccacagggtatgccgaaacatttagtgcaacatttcgcacagaaagcacga
gtgttaagcaaaccaatgcaaatgtctttcttaggtcctgtgggcagtgcaactaatgct
aacccttatgaagataagagcggacgtggtaaaggtcgtggcagagatggtcgccgtgaa
gaacgtggctttaaagatcgcaaagaaggcggatttaaagaaaaacgttttaacgagcgt
ggtcgtcgataa
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