Helicobacter pylori B38: HELPY_0539
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Entry
HELPY_0539 CDS
T00950
Name
(GenBank) ABC-type transport system, permease; putative betaine/proline/choline transporter; putative membrane protein
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
hpb
Helicobacter pylori B38
Pathway
hpb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HELPY_0539
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpb02000
]
HELPY_0539
Transporters [BR:
hpb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
HELPY_0539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CAX29075
UniProt:
C7BZ73
LinkDB
All DBs
Position
complement(528520..530190)
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AA seq
556 aa
AA seq
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MVIMLGMGVFKQLIRELYEWLLHSVDVVTQHLVAMVLKISMVKYLVKEFHDRFIYFIDLI
AQHFIIVALSSFLVLVFGVLIGVFVFYNSKARAFLLPVVNFLYTIPSLALFALFIPVIGV
GLKNALLVLVLYGLLPIVHSTYNALKEVREEVIKAAIGLGCNPKELFFRVHFLLAIPQIL
AGLRIAVVMLVAMAGIGALIGAGGLGQAIFRGLNTQNTTLLVAGSLIIALFSVLADKFVS
VFQHENALQRLFSQNATQKQKRRVYTNLAVFLFLLLASALWLIPRNAIEEKPLVVATKPS
SEQYILGEISSLLLEKHHIPIKRAFGIGGGTMNIHPALIRGDFDLYVEYTGTAWVNTLKN
PLAQKVDFETIKKRYEKEFNLLWVGLLGFNNTYSLAISKEDAQKYAIETFSDLAFHSLNF
DFGAEFDFFEREDAFKGLVKAYRFHFRSLHEMDINLRYKSFESHKINALDVFTTDAQIKE
LDLKVLKDDKGFFPNYQAGIVMRKEVVKKYPEALKILEKLDSKISDEMMQDLNYQVEVLK
KSPQIVAKDFLERLGL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
ttggttataatgctaggcatgggcgtttttaaacaattgatcagagaattgtatgaatgg
ttgctccattctgtggatgtggttacgcaacatttagttgctatggtgttaaaaataagc
atggtaaaatatttggtaaaagaatttcatgatcgcttcatttactttatagatttgatt
gcgcagcattttatcatcgttgcgctttctagttttctcgtgttggtgtttggggttttg
attggggtttttgtgttttataattcaaaggctagagcgtttttgctccctgtggtgaat
ttcctctacaccatcccatcgcttgcgttatttgcgttattcattcctgtgattggggtg
gggttaaaaaacgcgcttttagtgttggtcttatacggcttattgcccattgtccatagc
acttataacgctttaaaagaggtgcgagaagaagtcattaaggccgctattgggctaggg
tgtaacccaaaagagttgttttttagggtgcacttcttgctcgctatcccccaaatttta
gcgggcttaaggattgcggtggtgatgttagtagcgatggctgggattggggcgctcatt
ggggctgggggcttagggcaggcgatttttagagggctaaacacacaaaataccacgctt
ttagtggcgggcagtttgatcattgctctttttagcgttttagcggataaatttgtgagc
gtctttcagcatgaaaacgccttgcaacgcctattttctcaaaacgccacccaaaaacaa
aaaagaagagtttatactaatttagcggtgtttctttttttattgctagcgagcgcttta
tggctcattcctagaaacgccatagaagaaaagcccttagtcgtggcgacaaaacctagc
agcgagcagtatattttgggcgaaatttcaagccttttattagaaaaacaccatatccct
atcaagcgggcgtttggcattggtggggggacgatgaatatccatccggcattaattagg
ggcgattttgatttgtatgtggaatataccggcaccgcttgggtgaatacgctcaaaaac
cctttggctcaaaaagtggattttgaaacgattaaaaagcgttatgaaaaggaatttaat
cttttatgggtggggcttttgggctttaataacacctattccttagcgatttctaaagaa
gacgctcaaaaatacgcgattgaaactttcagcgatttagcctttcatagcctaaatttt
gattttggcgcggagtttgacttttttgaaagagaggacgcttttaagggcttagtgaaa
gcttatcgctttcattttagaagtttgcatgaaatggatattaatttgcgttataaaagt
tttgaatcccataaaatcaacgctttagatgtcttcactacagacgctcaaatcaaagag
ctggatttaaaggtgcttaaggacgataaagggtttttccctaattatcaggccggtatt
gttatgagaaaagaagttgtaaaaaaatatccggaagcgttaaaaatcttagaaaaattg
gattcaaaaattagcgatgaaatgatgcaagatttaaactatcaggtggaagtgttgaaa
aaaagcccccaaatcgtagctaaagattttttagaaagattagggttataa
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