Helicobacter pylori ELS37: HPELS_03860
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Entry
HPELS_03860 CDS
T01798
Name
(GenBank) regulator of nonsense transcripts 1
Organism
hpe
Helicobacter pylori ELS37
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Gene cluster
GFIT
Motif
Pfam:
AAA_12
UvrD_C_2
SchA_CurD
Glyco_hydro_46
Ndc1_Nup
Motif
Other DBs
NCBI-ProteinID:
AFF20316
UniProt:
H8H4Z9
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Position
complement(786437..788248)
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AA seq
603 aa
AA seq
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MLPFIVGGAILAVGFGALAFFFDVETEKEKERQNTLKKDIKDYTHKAQQAKKCHKHQQTL
KIADHCLNIIQRYLQEIERLQQEKKETPTQLKAVLEQIQQEMKSLPIQQKHALQIYYNRF
EDAQRRALAYLGYLSRLKIQLQEKEKRLKSDLGEIKKLEQKVKKNNENIASNQEWLERHR
EWRDESQSNNPDNADKMQERMDRNKDNIRKAKDFIAKTQNWIKKKECDIDEILKHIQTME
PNYLLPQDFLYVGKLACVNKSEIYAHDGDEESGWNIYGQRLSLESGEHEKKLWDSYNSQE
EFYILITRQNKEDNRFFKASLCKGLLYKHILEESVFEVSPNTIDWKMTKCLFHGIQLSLP
IEYKEFKHKKYTPRDTLKVWVTNYDSLLKSVFIAEKEPEPKHMDVIMLFNDRLGSQILKY
AYIFNDFNFNYSVLDYQKNGAIKNTSQFYDPKNIIRWINVEGEHQLEKTSSYNKDQVQKI
IELLEQINRALNQRKIRKTIGIITPYNAQKRRLRSEVEKCSFKNFDELKIDTVDAFQGEE
ADIIIYSTVKTCGNLSFLLDSKRLNVAISRAKENLIFVGKKSFFENLRSDEKNIFSAILQ
VCR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctaccctttattgtgggtggggctatcctagcagttggttttggggcgttagcgttt
ttttttgatgttgaaaccgaaaaagaaaaagaacgccaaaacacgctaaaaaaagatatt
aaggactacacgcacaaagcgcaacaggctaaaaaatgccataaacaccagcaaacccta
aagatcgcagaccattgtctcaatattatccaacgctatttgcaagaaattgaaagattg
caacaagaaaagaaagagacacccacgcaattaaaggctgtgttagagcaaatccaacaa
gaaatgaaatctctacccatacagcaaaaacatgcactgcaaatatattacaaccgcttt
gaagacgcgcaacgccgcgctttagcttatttgggttatttgtctcgcttaaaaattcaa
ttacaagagaaagaaaagcgccttaaaagtgatttgggtgagattaaaaaattagagcaa
aaggtcaaaaagaataacgagaatatcgccagtaaccaagagtggttggagaggcataga
gaatggcgtgatgaatctcaatccaacaatccagacaatgcagataagatgcaagaacga
atggatcgcaataaggacaatatcagaaaagccaaagattttatcgctaaaacccaaaat
tggataaagaaaaaagaatgcgacatagatgaaattttaaagcatatccaaactatggag
ccaaactatctcttgcctcaagactttctttatgttggaaaacttgcttgtgtcaataaa
agtgaaatctatgcgcatgatggagatgaagaaagtggctggaatatttatgggcaacgc
ctaagtttggaatctggagaacatgaaaaaaagttatgggattcttataactctcaagag
gaattttatattttaatcacacggcaaaataaagaagacaacagatttttcaaagctagc
ttgtgtaaaggtttgctctataaacacattttagaagagagcgtttttgaagtgtcgcct
aatacaattgattggaaaatgaccaagtgtttgtttcatgggatacaactttcactaccc
attgaatacaaggaatttaaacataaaaagtacacaccaagagatactctcaaggtgtgg
gtaacaaattatgacagcttgctaaaaagtgtattcattgctgaaaaagagccagaaccc
aaacacatggatgtgattatgctttttaatgaccgactgggatctcaaattttaaaatat
gcttatatttttaatgacttcaattttaattattccgtgttagattatcaaaagaatgga
gcaatcaaaaatacctcacaattttacgatcctaagaatattatccgttggattaatgtt
gaaggggagcatcaactagaaaaaacaagtagctataacaaagatcaagttcaaaaaatc
atagagcttttagagcaaatcaatcgcgctcttaaccaaagaaaaatcagaaaaaccata
ggaattatcacaccttataatgcccaaaaaagacgcttgcgatcagaagtggaaaaatgc
agcttcaagaattttgatgaactcaagatagacactgtggatgcctttcaaggcgaggag
gcagatattattatttattccaccgtgaaaacttgtggtaatctttctttcttgctagat
tctaaacgcttgaatgtagctatttctagggcaaaagaaaatctcatttttgtgggcaaa
aagtctttctttgagaatttgcgaagcgatgagaagaatatctttagcgctattttgcaa
gtctgtagatag
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