Helicobacter pylori F30: HPF30_0234
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Entry
HPF30_0234 CDS
T01895
Symbol
hopI
Name
(GenBank) outer membrane protein HopI
Organism
hpf
Helicobacter pylori F30
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP
Motif
Other DBs
NCBI-ProteinID:
BAJ56331
LinkDB
All DBs
Position
complement(238768..240870)
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AA seq
700 aa
AA seq
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MQDFIFNKKWLICSSLLPLFFLNPLAAEDDGFFMGVSYQTSLAIQRVDNSGLNASQDAST
YIRQNAIALESAAVPLAYYLEAMGQQTRVLMQMLCPDPSKRCLLYAGGYPKENNGDTGNN
PPRGNVNATFDMQSLVSNLDKLTQLIGETLIRNPENLSNAKLFEVKFGNQSTVIALPKGL
ANVMNALNDDITNALTTLWYNQTLTNKSFSTPDGSPVSFSPEVLQHLLQDGLATASGNQT
ICSTQNQCTATNEANSIAQNAQNIFQALMQAGILGGLANEKQFGFTYNKAPNGSNSQQGY
QSFSGPGYYTKNDNTTQAPLKELPAGATVGSGNGQYTYHPSSAVYYLADSIIANGITASM
IFSGMQNFANKAAKLTSTSRYSQMQEAINYGESLLNNTVAYGNFITNWVAPYLDLNNKGL
NFLPSYGGQLNGSNNQNPQTPQNHLTPQQAQQEQKVIMNQLEQATNAPTPAQIDKILANP
YSPTAKTLMAYGLYRSKAVIHGVINEMQTKINQVYQMGFARNFLEHNSNSNNMNGFGVKM
GYKQFFGKKRMFGLRYYGFYDFGYAQFGAGPSLVKATLSSYGAGTDFLYNVFTRKRGTEA
IDIGFFTGIQLAGQTWKTNFLDQVDGNHLKPKDTSFQFLFDLGIRTNFSKIAKQRRSRFS
QGIEFGVKIPVLYHTYYQSEGVTAKYRRAFSFYVGYNIGF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagactttatttttaataaaaaatggcttatctgttctagcctactccccttattt
tttcttaatcccttagcggctgaagatgatgggttttttatgggggtgagttatcaaact
tctctagccattcaaagggtggataactcagggcttaacgctagtcaagacgcatccacc
tacatccgccaaaacgctatcgctctagaatctgcggcagtgcctttagcctattattta
gaagcgatggggcaacaaactagagttttaatgcaaatgctctgccctgatccttctaaa
agatgtttgctctatgcggggggctatcctaaagaaaataatggcgatacgggcaacaat
cctccaagaggcaatgtcaatgccacctttgatatgcaatctctagtcagtaatttagac
aagctcacccaactcatcggcgaaactttaatccgtaaccctgaaaatctttctaacgct
aaactctttgaagtcaaattcggcaatcaaagcactgttattgccttgcctaaaggtcta
gccaatgtcatgaacgctttaaacgatgatattaccaacgctctaactacgctctggtat
aaccaaaccttaacgaataaatcttttagcacccctgatggcagtcctgtgagttttagc
cctgaagtcttgcaacaccttttacaagacggcttagccacagcaagcggtaatcaaacc
atttgcagcactcaaaaccaatgcaccgctactaatgaagctaactctatcgctcaaaac
gcccaaaacatcttccaggctttaatgcaagcagggattttagggggcttagccaatgaa
aagcaatttggcttcacttacaacaaagcccctaatggcagcaattcccaacaaggctac
caaagctttagtggcccaggttattacaccaaaaatgacaacaccacacaagcgccctta
aaagaattacccgctggagcaacagttggatcaggcaatggccaatacacttaccaccct
agctcggcagtctattatttagctgatagcatcatcgctaatggcatcaccgcttctatg
attttttcaggcatgcaaaatttcgccaataaagccgctaaactgacaagcacttcaaga
tatagccagatgcaagaagcgatcaactatggggaaagcttgctcaataacaccgtagcg
tatgggaatttcatcaccaattgggtcgccccctatttggatttaaataacaaaggtttg
aatttcttgcctagctatggggggcaattgaatggatccaataatcaaaatccgcaaacc
ccacaaaatcatttaaccccgcaacaagcccaacaagagcaaaaagtcatcatgaaccaa
ctagagcaagccacaaacgcccccacccctgcgcaaatagacaagatcttagccaacccc
tattcccccacagcaaaaactttaatggcttatgggctttatcgctctaaagcagtgatt
catggggtgattaatgaaatgcaaactaaaataaatcaagtctatcaaatgggctttgct
aggaattttttggagcataactctaattctaataacatgaacggctttggcgtgaaaatg
ggctataagcaattctttggcaaaaagcgcatgtttgggcttaggtattatggcttttat
gattttggttacgctcaatttggcgcaggaccttctttagtgaaagccactctctctagc
tatggggcaggcacagactttctttataatgtttttacccgaaaaagggggactgaagcg
atagatataggtttttttaccggaatccaacttgcagggcaaacctggaaaacgaatttt
ttagatcaagtggatggcaaccatcttaaacccaaagacacttctttccaattccttttt
gatttaggcataaggactaatttttccaaaatcgccaagcaaagaagatctcgtttttct
caagggatagaatttggcgttaaaataccggtgctttatcacacctattaccaatcagaa
ggcgttacagcgaagtatagaagagcctttagtttttatgtgggctacaacataggcttt
tga
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