Helicobacter pylori F30: HPF30_0509
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Entry
HPF30_0509 CDS
T01895
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
hpf
Helicobacter pylori F30
Pathway
hpf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPF30_0509 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpf03400
]
HPF30_0509 (uvrC)
DNA repair and recombination proteins [BR:
hpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPF30_0509 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAJ56606
LinkDB
All DBs
Position
complement(548357..550141)
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AA seq
594 aa
AA seq
DB search
MADLLSSLKNLSHSSGVYQYFDKNRQLLYIGKAKNLKKRIRSYFSIHNNEITPNYRASLR
IQMMVKQIAFLETILVENEQDALILENSLIKQLKPKYNILLRDDKTYPYIYMDFSTDFPI
PLITRKILKQPGVKYFGPFTSGAKDILDSLYELLPLVQKKNCIKDKKACMFYQIERCKAP
CENKITKEEYLKIAKECLEMIENKDKLIKELELKMERLSNNLRFEEALIYRDRIAKIQKI
APFTCMDLAKLYDLDIFAFYSGSNKAVLVKMFMRGGKIISSAFEKIHSLNGFDTDEAMKQ
AIINHYQSHLPLMPEQILLNACSNETLKELQEFISHQYSKKIALSIPKKGDKLALIEIAM
KNAQKIFSQEKTSNEDLILEEAQSLFKLECMPYRVEIFDVSHHANSQCVGGMVVYENHEF
QKNSYRRYHLKGSNEYTQMSELLTRRALDFAKEPPPNLWVIDGGRAQLNIALEILKSSGS
FVEVIAISKEKRDSKAYRSKGGAKDIIHTARDTFKLLPSDKRLQWVQKLRDESHRYAINF
HRSTKLKNMKQIALLKEKGIGEASVKKLLDYFGSFEAIEKASEQEKNAVLKKRI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttattgtccagtttaaaaaacctttctcatagcagtggcgtgtatcaatat
tttgataaaaaccgccaattactctatatcggtaaggcgaaaaatttaaaaaagcgcatc
agaagctatttttctatccacaataatgaaatcacgcccaattatcgcgcaagcttacga
atccaaatgatggtcaaacagatcgcttttttagaaaccattttagtggaaaacgaacaa
gacgctttgattttagaaaattctttaatcaaacagctcaagcccaaatacaacattctt
ttaagagatgataaaacttacccttatatttacatggatttttccactgatttccctatc
cctttaatcacacgaaaaattttaaaacagcctggcgttaaatattttggcccttttacg
agcggggctaaagatattttagacagcttgtatgaattgctcccgttagttcaaaagaaa
aattgcatcaaagataaaaaggcatgcatgttttatcaaatagagcgttgtaaagcccca
tgcgagaataaaatcaccaaagaagaatatttgaaaatcgctaaagaatgtttagaaatg
attgaaaataaagacaaactcatcaaagagcttgaattaaaaatggagcgcctttctaat
aacttgcgttttgaagaagccctcatttatagggataggattgcaaaaatccaaaaaatc
gcccctttcacttgcatggatttagccaaactctacgatttggatatttttgctttttat
agtgggagtaataaggcggtgttagtgaaaatgtttatgcgtgggggtaaaatcatttct
tcagcgtttgaaaaaatccactctctcaatgggtttgacactgatgaagcgatgaaacaa
gccattatcaatcattaccaatcgcatttgcctttgatgcctgaacagattttattgaac
gcttgctctaatgaaacgcttaaagaattgcaagaatttatctctcatcaatattctaaa
aaaatcgctcttagtattcctaaaaaaggcgataagctcgctttaatagaaatcgctatg
aaaaacgctcaaaagatttttagccaggaaaaaacctctaatgaagatctgattttagaa
gaagcgcaatcgctctttaaattagagtgcatgccttatagggtggaaatctttgatgta
agccaccatgccaacagccaatgcgtggggggaatggtcgtgtatgaaaatcatgaattt
caaaaaaactcctatcggcgctaccatttaaaaggctctaatgaatacactcaaatgagc
gaattgctcaccagaagggctttagattttgccaaagagccaccgcctaatttgtgggtg
atcgatggagggagggcgcaattaaacatcgctttagaaattttaaaaagcagcgggagt
tttgtagaagtgatcgctatttctaaagaaaaaagggattctaaagcttatcgctctaaa
gggggcgctaaagacattatccacaccgctagagatacttttaaattgctccctagcgac
aaacgcttgcaatgggtgcaaaaattgcgcgatgaaagccaccggtatgcgataaacttc
catagatccactaaactcaaaaacatgaaacaaatcgctcttttaaaagaaaagggtata
ggagaagccagcgtgaaaaaattgttggattattttgggagttttgaagcgatagaaaaa
gcgagcgagcaagaaaaaaacgctgttttaaaaaaacgaatttaa
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