Helicobacter pylori SJM180: HPSJM_06405
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Entry
HPSJM_06405 CDS
T01323
Symbol
trpA
Name
(GenBank) tryptophan synthase subunit alpha
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00260
Glycine, serine and threonine metabolism
hpm00400
Phenylalanine, tyrosine and tryptophan biosynthesis
hpm01100
Metabolic pathways
hpm01110
Biosynthesis of secondary metabolites
hpm01230
Biosynthesis of amino acids
Module
hpm_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPSJM_06405 (trpA)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
HPSJM_06405 (trpA)
Enzymes [BR:
hpm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
HPSJM_06405 (trpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
Motif
Other DBs
NCBI-ProteinID:
ADO02845
UniProt:
E1Q137
LinkDB
All DBs
Position
complement(1297101..1297889)
Genome browser
AA seq
262 aa
AA seq
DB search
MRYQNMFETLKKHEKMAFIPFVTLGDPNYEWSFEIIKTLIDSGVSALELGFAFSDPVADG
VTIQASHLRALKHASMAKNFQLLKKIRGYNHDIPIGLLAYANLIFSYGVDGFYAQAKECG
IDSVLIADMPLIEKELVIKSAQKHQIKQIFIASPNASSKDLEQVATHSQGYIYTLARSGV
TGASHTLENDASAIIKTLKTFSPTPALLGFGISQKEHITNAKGMGADGVICGSALVKIIE
ENLNNEDAMLEKIKGFIGGMIF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatcaaaacatgtttgaaaccttaaaaaaacacgaaaaaatggcgtttatcccg
tttgtaaccttgggcgatcctaattatgaatggagttttgaaatcattaaaaccttaatt
gatagcggggtgagtgctttggaattgggctttgctttctcagatcctgtagcggatggc
gttaccatacaagcgagccatttaagggcgttaaaacacgctagcatggctaaaaatttc
cagcttttaaaaaagattagaggctacaaccatgatattcccatagggcttttagcgtat
gcgaatttaattttttcttatggcgttgatggcttttacgctcaagctaaagaatgcggt
atagatagcgttttaatagcggacatgcccctaatagaaaaagaattagtcatcaaatcc
gctcaaaaacaccaaatcaagcaaatctttatcgccagccccaatgcgagcagtaaagat
ttagaacaagtcgctacgcattcgcaaggctatatctacactttagccaggagtggggtt
acaggggcgagccatactttagaaaatgacgcgagcgctattattaaaaccttaaaaacc
tttagccctacccccgcattactaggctttggcatttctcaaaaagaacacatcacaaac
gctaaaggcatgggcgctgatggcgtgatttgcggatcagcgttagtcaaaatcatagaa
gaaaatttaaacaatgaagacgccatgctagaaaaaattaaagggtttataggaggaatg
attttttaa
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