Helicobacter pylori 35A: HMPREF4655_20158
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Entry
HMPREF4655_20158 CDS
T01892
Name
(GenBank) UvrD/REP helicase
Organism
hpo
Helicobacter pylori 35A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Cas_Cas4
DEAD
AAA_30
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ADU40324
LinkDB
All DBs
Position
156784..159633
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AA seq
949 aa
AA seq
DB search
MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYL
KILQKENLENEKEKEKSQNILKELEEKYRLDPSFVQNSAQKIYQRFLNAEIRISTIDAFF
QSILRKFCWFVGLSANFEVNEDTKAYQQQLNESFLSALNNKQLEELSVFIAQCLSYDSYT
SDSILEWLRFLKNKLYLFDPNKKEPAFDEEGFLEKLRSLNRQIQSVETASNEAKKAIKCD
DFRGFLNSSLTWLEKKSEYRYFKKFKDEIPTLESECEEIENDLRRYYEARESALFKKFPK
FIQLYDKATSKIQALDFDAIKDKVHALLNGYEEMPAEFFYFRLDSRIAHILIDEFQDTSL
NDYKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYGFRGSFSSLFESVSKDFYHDNLP
FNHRSSPLIINYVNTIFKKAYQNSPTAYWEQKYPKASSNKHARDGYVKVSLVADERELLL
EQILQEAKNLLEHRIDPKDITLLCATNDDALEIKNYLQKNLSAIRPSTESSAKLSQFVES
KIIKNALEYALAEEPYKPFYKHSVLKLAGYLHDDAIALAGFNPKKESVAGFVWKVMELFE
LYGECAQICLELAVGCEDANEFLEKLEAKEIASFKAEGAQVMTIHKSKGMQFPYVIVCER
LGKPKTNNSNQFLEEYSGTELTRLYYRMKNREVVDKDYARALDKEEAAKDHEETNVYYVA
FTRAELGLIVVAKDKDQKKDKKESKSKGMREKLDLAPLEEGEIAPVISSQKEPSPESVVI
KPHAYGEQVQEMEEEPSDYEKNNDQEAINFGIALHKGLEYQYAYRIPKKSVLEYLNYHHG
FYGLDYQALEESLELFENDAKIQALFKNLALRGEVAFLFEGVVSRIDVLLWDKGQNLYVL
DYKSSQNYQQSHKAQVSHYAAFLQTQAPHFKIQAGIIYAHKRLLEKLWV
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaaaaggcaatgcatggctttaaaggcttcagcaggaagcgggaagactttc
gctttgagcgtgcggtttttagccctattgtttaagggggctaatcctagcgagatttta
acgctcactttcactaaaaaagccaccgccgaaatgaaagagcgcattttagactattta
aaaattttgcaaaaagagaaccttgagaatgaaaaagaaaaagaaaaatcccaaaatatc
ctaaaagaattagaagaaaaataccgcttagaccctagtttcgtgcaaaatagcgctcaa
aaaatctaccaacgctttttaaacgccgaaattagaatcagcaccattgatgcgtttttc
caaagtattttaaggaaattttgctggtttgtggggttgagcgcgaattttgaagtcaat
gaagacacaaaagcgtaccagcaacagctcaatgagagttttttgagcgctttaaataat
aaacagcttgaggaattgagcgtttttatcgctcaatgcttaagctatgatagttacaca
agcgattctattttagagtggctgcgttttttaaaaaacaagctctatttatttgatccc
aataagaaagagcccgcatttgatgaagagggttttttagaaaaactaagaagcttaaac
agacagattcaaagcgtagaaacagcgtcaaatgaggctaaaaaagccattaaatgcgat
gattttagggggtttttaaacagctctttaacctggcttgaaaaaaagagcgaatatcgc
tatttcaaaaaattcaaagatgaaatccccactttagagagcgaatgcgaagagattgaa
aacgatctaagacgctattatgaagccagagaaagcgcattgtttaaaaaattccctaaa
ttcatccagctttatgataaagccacttctaaaatccaagccctggattttgatgcgatt
aaagataaagtccatgccttattgaatggttatgaagaaatgccagcggagtttttttat
ttcagactggacagcaggatcgcacacattttgattgatgaatttcaagacacgagcttg
aacgattataagattttagccccttttattgatgagattaaggccgggatagggcaagct
aaatggcacaggagcgtgttttttgtgggtgatgtcaagcagagcatttatggttttagg
gggagttttagctccttatttgaaagcgtttctaaagatttttaccacgataatttacca
ttcaaccaccgcagttcgcctttgattattaattatgtgaataccatttttaaaaaggct
tatcaaaattcccccaccgcttattgggagcaaaaataccctaaagcttccagcaataaa
catgctagagacggctatgttaaagtctctttagtggctgatgaaagagaattgttgtta
gaacaaatcttgcaagaagctaaaaaccttttagagcatcgcattgatcctaaagacatt
acccttttatgcgccactaatgatgacgctttagaaatcaaaaattatttgcaaaagaat
ttgagcgcgattcgcccaagcacggaatctagcgctaaattgtctcaatttgtagaatcc
aaaatcattaagaacgctttagaatacgctctggctgaagaaccttacaagcccttttat
aagcacagcgttttaaaactcgctggatacttgcatgatgatgccatcgctttagctggt
tttaaccctaaaaaagagagcgtggcaggctttgtatggaaagtgatggaattgtttgaa
ctttatggggagtgtgcgcaaatctgcttggagttggcggttgggtgcgaagacgcaaat
gaatttttagaaaaattagaggctaaagagattgcttctttcaaagcagaaggcgcacag
gttatgactatccataaatctaaaggcatgcaattcccttatgtgatcgtgtgcgaacgc
ttgggcaagcctaaaacgaataactccaatcaatttcttgaagaatatagcggcacagag
cttacacgcctttattacagaatgaaaaatcgtgaggtggtggataaagattacgctagg
gctttagataaagaagaagcggctaaagatcatgaagaaaccaatgtgtattatgtcgca
ttcactagggctgagttagggctgattgtcgtggctaaagacaaagaccaaaaaaaagac
aaaaaagaaagcaaaagcaaaggaatgcgtgaaaaattggatcttgcgcctttagaagag
ggagaaatcgcaccggttatttcttctcaaaaagagccttcgcccgagagcgttgtaatc
aaaccccatgcctatggcgagcaagtccaagagatggaagaagagcctagcgattatgaa
aagaataacgaccaggaagcgatcaattttggtatcgccttgcacaagggattagaatac
caatacgcttatcgcattcctaaaaaaagcgttttagaatatttaaactaccatcatggt
ttttatggtttggattaccaagcgttagaagaaagtttagagctttttgaaaacgatgca
aagatacaagctctttttaaaaatttggctttaaggggtgaagtggcttttttatttgaa
ggggttgtgtctaggattgatgttttattgtgggataaggggcaaaatttgtatgtttta
gattataaaagctctcaaaattaccagcaaagccataaggcgcaagtttctcattacgct
gcgtttttgcaaactcaagccccccattttaagatacaagcgggcattatttacgctcat
aaaagactgcttgaaaaattatgggtttga
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