Helicobacter pylori 2017: hp2017_0218
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Entry
hp2017_0218 CDS
T01913
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hpq
Helicobacter pylori 2017
Brite
KEGG Orthology (KO) [BR:
hpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpq03016
]
hp2017_0218 (gidA)
03036 Chromosome and associated proteins [BR:
hpq03036
]
hp2017_0218 (gidA)
Transfer RNA biogenesis [BR:
hpq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
hp2017_0218 (gidA)
Prokaryotic type
hp2017_0218 (gidA)
Chromosome and associated proteins [BR:
hpq03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
hp2017_0218 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
Pyr_redox_3
FAD_oxidored
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_binding_3
Thi4
Motif
Other DBs
NCBI-ProteinID:
ADZ49299
LinkDB
All DBs
Position
complement(211822..213687)
Genome browser
AA seq
621 aa
AA seq
DB search
MVKESDILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKE
VDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQ
EMTESLILENDEVVGVTTNINNTYRAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNS
LALNLRELGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDANPPYFSYKTKDFNPTQLSCF
ITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIH
KSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHALETKKIK
GLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQTPFILKRNEAYIGVLIDDLVTKGTN
EPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYEELKKDQQAIQENLKRLKEC
VLTPSKEVLKRLSELDENPINDKMDGVSLLARDSFNAEKMRSFFSFLAPLNERVLEQIKI
ECKYNIYIEKQHENIAKMDSMLKVSIPKHFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI
SGITPANLDVLHLYIHLRKNS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagaaagtgatattttagtggttggtggagggcatgcaggcattgaagcgagc
ttgattgcggctaaaatgggggctagagtgcatttaatcaccatgctcatagacacgatc
ggtttagcgagctgtaatccggccattggaggcttgggtaaagggcatttgactaaagaa
gtggatgtgttagggggggctatggggattattacggatcatagcggtttgcaatatcgt
gtgttaaacgcttctaaagggccggcggttagggggactagagcgcaaattgatatggat
acttaccgcatttttgcaagaaatctcgttttaaacacccctaatttgagcgtctctcaa
gaaatgaccgaaagtttaatccttgaaaacgatgaggtagtgggcgtaaccacgaacatc
aataacacttacagagctaaaaaagtgatcatcaccacaggcacttttttaaaaggggtg
gtgcatattggcgagcaccaaaaccaaaacgggcgctttggggaaaacgcttccaattct
ttagccttgaatttaagggagcttggctttaaggtggagaggttaaaaaccggcacttgc
ccaagagtggccggtaatagcattgattttgaaggcttagaggagcattttggggatgca
aaccctccctattttagctataaaaccaaagattttaaccccacccaactctcttgtttc
atcacttacactaaccccattacccaccaaatcattagggataatttccaccgagccccc
ctttttagcggtcaaattgaaggcataggccctaggtattgccctagcattgaagataaa
atcaaccgctttagcgaaaaagaacgccaccagctgtttttagagcctcaaaccattcat
aaaagcgaatattatatcaacggcttaagcacctctttgcccctagacgtgcaagaaaag
gtcattcattctatcaaaggcttagaaaacgccctcatcacgcgctatggctatgcgata
gagtatgatttcatccagcccacagaattgacccacgctttagaaaccaaaaaaatcaaa
gggctttatttggccgggcaaatcaatgggactaccggctatgaagaagcggcggctcaa
gggcttatggctgggattaatgcggtgttagccttaaagaatcaaaccccctttatttta
aaacgcaatgaagcttatatcggcgttttgattgatgatctggttactaaaggcacgaat
gagccttacagaatgtttaccagccgtgccgaataccgcttgcttttaagagaagacaac
acgctttttagattaggtgaacatgcctatcgtttagggcttatggaacaggatttttat
gaggaattaaaaaaagaccaacaagcaatacaagaaaacttgaaacgccttaaagaatgc
gtgcttacccctagcaaagaagtgttaaaacgcttgagtgaattagatgaaaaccctatc
aatgacaaaatggatggcgtcagccttttagcgcgcgatagttttaatgcagaaaaaatg
cgctccttttttagctttttagcccctttgaatgagcgggttttagagcagattaaaatt
gaatgcaagtataatatttatattgaaaaacaacacgaaaatatcgctaaaatggatagc
atgctcaaagtgtctatccctaaacattttgtgtttaaaggcattccaggccttagctta
gaagcggtagaaaaattagaaaaattccgccccaaaagcctttttgaagcttcagaaatc
agtgggatcaccccggcgaatttagatgttttgcatttgtatatccatttgcggaaaaac
tcttaa
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