Helicobacter pylori Cuz20: HPCU_05405
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Entry
HPCU_05405 CDS
T01894
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hpu
Helicobacter pylori Cuz20
Pathway
hpu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPCU_05405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpu03400
]
HPCU_05405
Enzymes [BR:
hpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPCU_05405
DNA repair and recombination proteins [BR:
hpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPCU_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
PriA_3primeBD
AAA_19
AAA_22
ADDB_N
PhoH
nSTAND3
AAA_7
zf-Di19
AAA_30
CobU
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ADO04230
LinkDB
All DBs
Position
complement(1108845..1110704)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYHLIAPLKNKTPPLTYFSKERHQKGALVNIHLRNKTLLGVVLGEVSKPSFECLELEKT
PYFLLPFQIELAIFIAQYYSANLSSVLNLFTPFKECDLVGLEKIEPVLNALSQTQTNALK
ELQKHSASLLFGDTGSGKTEIYMHSIAQTLEQKKSALLLVPEIALTPQMQQRLKRVFKEN
LGLWHSKLSQTQKKQFLEKLYSQEIKLVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYTPTQKNIIFEKTE
RFITSKLLEALKQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSSPIPKICSVCQSEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSSFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKTAPNIPCSVNMDPVDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacttaatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaagagcggcaccaaaaaggagcgttagtcaatatccatttgaggaataaaacgcttttg
ggcgtcgttcttggagaagtttcaaaaccctcttttgaatgcctagaactagaaaaaacc
ccttattttttactcccctttcaaatagagctcgctatatttatcgctcaatattactcg
gctaatctttcttcagtcttaaatctttttaccccttttaaagaatgcgatttagtgggg
ttagaaaaaattgagcccgttcttaatgcgttaagccaaacgcaaacaaacgctttaaaa
gaattgcaaaaacattcagcaagtttgctctttggcgatacgggtagcgggaaaaccgag
atttatatgcattcaatcgctcaaactttagagcaaaaaaaaagcgctttattattggtg
ccagaaatcgccctcacccctcaaatgcaacaacgccttaaaagggtctttaaagaaaat
ttaggcttgtggcatagcaaactctctcaaacccaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattagtggtaggcacacgaagcgcattgtttttaccccttaag
gagttgggtttaatcattgtagatgaagagcatgacttttcttataaatctcatcaaagc
cctatgtataacgctagggatttatgcttgtatttatcccataaattccctattcaagtg
attttaggctctgctacgccaagtttaaatagttacaaacgctttaaagataaggcttta
gtgcgcttaaaggggcgctacacgcctacgcaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgtccaaactcctagaagcgctaaaacaagttatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaattttaaaaccttgctgtgtcaaaattgctat
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaaaaccaacaaa
ctcatgtgccattattgccatttttcaagccctatccctaaaatttgcagcgtgtgtcaa
agcgaagttttagtgggtaaaaggataggcaccatgcaagtgttgaacgagttggaaggc
cttttgaaaggcgctaaaatagccattttagataaagatcataccagcacgccaaaaaaa
ctccacaatattttaaacgatttcaacgctcaaaaaaccaatatcttaatcggcactcaa
atgataagcaaagggcatgattacgctaaagtgagtttagcggttgttttaggcatagac
aatatcattaaatccaatagttatagggctttagaagaaggcgtgtcgttactttatcaa
atcgctgggaggagcgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacg
gatctattagaaaattttttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgttagagtttaagcataaaaac
gaagaaaaagcccaacaattgagcctaaaagcctcccaaaccctttcttcgtgtttagaa
aagggcgtaacgctctctagctttaaagcccccattgaaaaaatcgcctcttcttaccgc
taccttattttgttgcgttccaaaaaccctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgcccccaatatcccttgcagcgtgaatatggatcctgtggatattttttaa
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