KEGG   Helicobacter pylori v225d: HPV225_0308
Entry
HPV225_0308       CDS       T01899                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
hpv  Helicobacter pylori v225d
Pathway
hpv00300  Lysine biosynthesis
hpv00470  D-Amino acid metabolism
hpv01100  Metabolic pathways
hpv01110  Biosynthesis of secondary metabolites
hpv01120  Microbial metabolism in diverse environments
hpv01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:hpv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HPV225_0308 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HPV225_0308 (lysA)
Enzymes [BR:hpv01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     HPV225_0308 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ADI34399
LinkDB
Position
292931..294148
AA seq 405 aa
MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKKAFKGRKSLICYALKANSNLSILSLLAHL
ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIE
KIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPI
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQGILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDRQIRVIRKREALEDLWRLEEEGLKGV
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaaaaagcgtttaaggggcgtaagtctttg
atttgctacgctttgaaggcgaattccaatctgagtattctctccttattagcccattta
gagagcggggcagattgcgtttccataggcgagatatatagggctttaaaagccgggatc
aagccttataggatcgtgtttagcggggtgggtaagagcgaatttgaaatagagcaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattgcaaacgattgaa
aaaatcgcccaatctttagggataaaggctaggatttccattagaatcaaccccaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctatt
agcgtgcattttcatatcggctcacagcttttggatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatagcgctagggatagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgagaatgaagagactatcaagctttatgat
tacgcgcaagggatcttaaacgcgcttcaaggcttggatttgacgattatttgtgagccg
ggccgttccatcgtggctgagagtggggaattgatcacgcaggttttatatgaaaaaaag
gctcaaaacaagcgttttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccttctaaggggcgtaagatctcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaaggcgtccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggctct
agcatggccagccaatacaattcgcgccccaaactcttagaattagccctagaagatcgc
caaatcagggtgataagaaaaagagaggctttagaagatttatggcgcttagaagaagaa
ggcttaaaaggggtttga

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