Helicobacter pylori v225d: HPV225_0308
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Entry
HPV225_0308 CDS
T01899
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00300
Lysine biosynthesis
hpv00470
D-Amino acid metabolism
hpv01100
Metabolic pathways
hpv01110
Biosynthesis of secondary metabolites
hpv01120
Microbial metabolism in diverse environments
hpv01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPV225_0308 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPV225_0308 (lysA)
Enzymes [BR:
hpv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HPV225_0308 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADI34399
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Position
292931..294148
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AA seq
405 aa
AA seq
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MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKKAFKGRKSLICYALKANSNLSILSLLAHL
ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIE
KIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPI
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQGILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDRQIRVIRKREALEDLWRLEEEGLKGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaaaaagcgtttaaggggcgtaagtctttg
atttgctacgctttgaaggcgaattccaatctgagtattctctccttattagcccattta
gagagcggggcagattgcgtttccataggcgagatatatagggctttaaaagccgggatc
aagccttataggatcgtgtttagcggggtgggtaagagcgaatttgaaatagagcaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattgcaaacgattgaa
aaaatcgcccaatctttagggataaaggctaggatttccattagaatcaaccccaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctatt
agcgtgcattttcatatcggctcacagcttttggatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatagcgctagggatagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgagaatgaagagactatcaagctttatgat
tacgcgcaagggatcttaaacgcgcttcaaggcttggatttgacgattatttgtgagccg
ggccgttccatcgtggctgagagtggggaattgatcacgcaggttttatatgaaaaaaag
gctcaaaacaagcgttttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccttctaaggggcgtaagatctcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaaggcgtccat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggctct
agcatggccagccaatacaattcgcgccccaaactcttagaattagccctagaagatcgc
caaatcagggtgataagaaaaagagaggctttagaagatttatggcgcttagaagaagaa
ggcttaaaaggggtttga
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