Helicobacter pylori 83: HMPREF0462_0918
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Entry
HMPREF0462_0918 CDS
T01915
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hpx
Helicobacter pylori 83
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpx03032
]
HMPREF0462_0918 (gyrB)
03400 DNA repair and recombination proteins [BR:
hpx03400
]
HMPREF0462_0918 (gyrB)
Enzymes [BR:
hpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0462_0918 (gyrB)
DNA replication proteins [BR:
hpx03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0462_0918 (gyrB)
DNA repair and recombination proteins [BR:
hpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0462_0918 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AEE70523
UniProt:
F4D698
LinkDB
All DBs
Position
complement(907289..909610)
Genome browser
AA seq
773 aa
AA seq
DB search
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYEDGLKQFVKDSAKKELLTPVIS
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHETGFKMGLSKAILQYIDEN
IKTRESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYVRALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYALLELEKRYNLLEILRF
LIETKDALSFDMKILEKSILEKLEGLNYQILRSFATEESLHLHAQTPKGLVEFNLDDNLF
KEVLFEEANYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIKDLEKTDAVFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattaccagagccatagtatcaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggcgataccaatgtgggtgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgcgatacgattaatatcact
ttgactgatgagggttcatgcattgtagaagataatgggcgaggcattcctgtagatatt
caccccacagaaaaaatccctgcttgcaccgtggttttaacgattttgcatgcggggggc
aagtttgataatgatacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttaagcaaacgcttgattatgaccattaaaaaagagggtcaaatctatcgc
caagagtttgaaaagggtatccccattagcgagcttgaaatcattggcaaaaccaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttgcaaaagcgcttcaaagaaatggcgtatcttaatgacggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcaagagacttatttctatgaagac
ggcttgaaacaattcgttaaagacagcgctaaaaaagaactgctcacccccgttatttcg
tttaaaagcatggatgaagaaacgcgcacttctatagaagtcgctttagcgtatgctgat
gattacaatgaaaacactttaagctttgtgaataacatcaaaacttctgagggtggcacg
catgagacgggctttaaaatgggcttgtctaaggcgattttacaatatattgatgaaaac
attaagacaagagaatcccgccccatttctgaggacattaaagagggcttgattgcggtt
gtgagcttgaaaatgagcgagcctttatttgaagggcagactaaatccaaactcggtagt
tcgtatgtgcgcgcgttggtttcaaaattagtctatgataaaatccaccaatttttagaa
gaaaaccctaacgaagccaaaatcattgccaataaagcccttttagccgcaaaagccaga
gaagccagtaaaaaagccagagagcttacaaggaaaaaagataatttgagtgtcggcact
ttgcctggaaaattagccgattgccagagtaaagatcccttagagagtgaaatcttttta
gtggagggcgatagcgcgggcgggagcgctaaacaagggcgcgatagggttttccaagcg
attttgcccttaaaaggtaagattttaaatgtggaaaaaagccatttgtcaaaaatccta
aaatcagaagagattaaaaacatgatcacggcttttgggtgcggcattcaagagagtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttacgcccgctgattgaa
caagggcatgtttatatcgctcaagcccctctttacaaatacaagaagggcaagacagaa
atctatcttaaagacagcgtcgctttggatcatttcttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttgttaaaagtggcgcgccat
taccgctacgcgcttttagaattagaaaaacgctacaatttgctagaaattttacgcttt
ttgattgaaactaaggacgccttaagctttgatatgaaaattttagaaaaaagcattttg
gaaaaattagagggcttgaattatcagatcttacgctcttttgctactgaagaaagcttg
catttgcacgcgcaaacccctaaaggcttggtggaatttaacctagatgacaacctcttt
aaagaagtgttgtttgaagaagcgaattacacctaccaaaagcttatggagtataattta
gatttcttagaaaacaaggatattttggcgtttttagaagaagtggaaaatcacgctaaa
aagggagcgaatatccagcgctataaggggctaggcgagatgaaccctaatgatttgtgg
gaaacgaccatgcataaagaaaaccgcagcttaatcaaactcaaaattaaagatttggaa
aaaaccgatgcagtcttttcgctttgcatgggcgatgaggtagagcctagaagagccttt
atccaagcgcatgctaaagatgtgaagcagctagatgtgtaa
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