Helicobacter pylori Aklavik117: HPAKL117_01445
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Entry
HPAKL117_01445 CDS
T02352
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya00300
Lysine biosynthesis
hpya00470
D-Amino acid metabolism
hpya01100
Metabolic pathways
hpya01110
Biosynthesis of secondary metabolites
hpya01120
Microbial metabolism in diverse environments
hpya01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPAKL117_01445
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPAKL117_01445
Enzymes [BR:
hpya01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HPAKL117_01445
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFX90704
UniProt:
K7Y4H5
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All DBs
Position
298114..299334
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AA seq
406 aa
AA seq
DB search
MLNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLARL
ESGADCVSIGEIHRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIE
KIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPI
SVHFHIGSQLLDLEPIVEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQGILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPS
LYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKGVYLPELEPGDKLVIEKVGAYGS
SMASQYNSRPKLLELALEDQKIRVIRKREALEDLWRLEEEGLKGFD
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgttgaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaagtctttg
atttgttacgctttaaaggcgaattccaatttgagtattctctctttattagcccgttta
gagagcggagccgattgcgtttccataggcgagatacatagggctttaaaagccgggatc
aagccttataggatcgtgtttagtggggtgggtaagagcgaatttgaaatagaacaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattgcaaacgattgaa
aaaatcgcccaatctttagggataaaggctaggatctctattagaatcaaccccaacatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtggga
gaaaaagaagctttagagatgtttctttgggctaaaaaaagcgcgtttttggagcctatt
agcgtgcattttcatatcggctcacagctattagatttagagccgattgtagaagcgagc
caaaaggtggctaaaatcgctaaatctttgatagcgctagggatagatttgcgttttttt
gatgtgggcggagggattggcgtgagctatgaaaatgaagagactatcaagctttatgat
tacgcgcaagggatcttaaacgcgcttcaaggcttggatttgacgattatttgtgagccg
ggccgatccatcgtggctgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtgattgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccctctaaggggcgtaagatctcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaaggcgtttat
ttgccagaattagagccaggcgataaattagtcatagaaaaggttggggcttatggctct
agcatggccagtcaatacaattcgcgccccaaactcttagaattagccctagaagatcaa
aaaatcagggtgataagaaaaagagaggctttagaagatttatggcgcttagaagaagaa
ggcttaaaagggtttgattag
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