Helicobacter pylori oki102: HPOKI102_03385
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Entry
HPOKI102_03385 CDS
T03182
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hpyb
Helicobacter pylori oki102
Brite
KEGG Orthology (KO) [BR:
hpyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpyb03009
]
HPOKI102_03385
Enzymes [BR:
hpyb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPOKI102_03385
Ribosome biogenesis [BR:
hpyb03009
]
Prokaryotic type
ribosomal protein modification factors
HPOKI102_03385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Ca_bind_SSO6904
DUF2981
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
AHN34649
LinkDB
All DBs
Position
660906..662225
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AA seq
439 aa
AA seq
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MQIKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDTKSADVILINTCGFIESAKQES
IQTILNAAKDKKKGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVE
NLVLKGYTDMTFIAQDSSSFLYDKGQKDGLIQLISAIDKQQALKSGRILYLYPSSTTLDL
IGAIEDSLIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNHSFKALLNKPIKALVENKEGEYFYKARDLRWAPEVDGEILINDSELTTPLKPGHYT
IMPSEFKDNILLAKVLSPF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaagaaaacaaacaactctgcttaatctcattaggttgctctaaaaatttg
gtggattcagaagtgatgttaggcaagctttataactacacgctcactaatgacactaag
agtgctgatgtgattttgatcaacacttgcggttttattgaaagcgccaaacaagagagt
atccaaaccattctaaacgccgctaaagacaaaaaaaagggagcgattttgattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagagttgatccctgaagtggatatt
tttaccggcgtgggggattatgacaagattgatataatgatcgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttaagcgagcattataacgcacgcatcatcacgggatcgagc
gtgcatgcgtatgttaaaatttctgagggttgcaatcaaaaatgctctttttgcgctatc
cctagctttaaggggaaattacaaagcagggaattagactccattttaaaagaagtggaa
aatctcgtgcttaaaggctatacggatatgacttttatcgcacaagattctagctccttt
ttatacgataaagggcaaaaagacggcttgatccagcttattagcgcgattgacaaacag
caagccttaaagagtggtcgaatcttatacctctacccttctagcaccactttagatctg
attggtgcgattgaagactcgcttatttttcaaaattattttgacatgcccatccagcac
atcagcgactccatgctcaaaaagatgcggcgcaattccagccaagcgcaccatttaaag
cttttaaatgccatgaagcaggttaaagaaagctttataagaagcacgatcattgtaggg
catccggaagaaaatgagggcgaatttgaggaattgagcgcgtttttggacgagttccgg
tttgatagattgaatatttttgctttcagcgctgaagaaaacacgcatgcctattcttta
gagaaagtgcctaaaaaaatcatcaacgctcgcattaaagccttgaataaaatcgcttta
aagcaccaaaaccattcctttaaggctttgttgaataagcccattaaggcgttagtggaa
aataaagagggcgagtatttttacaaagcaagggatttgagatgggcgcctgaagtggat
ggggaaattttgatcaatgatagcgaactaaccacccctttaaaacccgggcattatacg
attatgcctagcgaatttaaagacaatatcttactcgctaaggttttaagccctttttaa
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