KEGG   Helicobacter pylori oki128: HPOKI128_05465
Entry
HPOKI128_05465    CDS       T03724                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hpyd  Helicobacter pylori oki128
Pathway
hpyd02024  Quorum sensing
hpyd03060  Protein export
hpyd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpyd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPOKI128_05465
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPOKI128_05465
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPOKI128_05465
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpyd02044]
    HPOKI128_05465
Enzymes [BR:hpyd01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HPOKI128_05465
Secretion system [BR:hpyd02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPOKI128_05465
  Eukaryotic Sec-SRP protein
   HPOKI128_05465
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 AAA_22 Zeta_toxin AAA_24 AAA_30 nSTAND3 AAA_17 SLFN-g3_helicase cobW APS_kinase ArsA_ATPase 6PF2K AAA_19 AAA_16 AAA_14 Fer4_NifH AAA_11 AAA ABC_tran AAA_33 T2SSE NTPase_1 Thymidylate_kin ParA DO-GTPase1 ResIII KTI12 NACHT AAA_5 TsaE ParBc AAA_18 ATP_bind_1 YqeC
Other DBs
NCBI-ProteinID: AHN37949
LinkDB
Position
complement(1108942..1110288)
AA seq 448 aa
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEIKEILNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMANALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMH
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaagcattaagcgatgggtttaaaaacgcgctcaataaaatccgttttcaagat
gatgaaaaagcgctagatcgggcgttagatgaattgaaaaaaacgcttttaaaaaatgat
gtgcatcataaagtggctagagaattgctcaaaaaagtggaaagtcaaacgaaacttaat
ggcattggtaagcaacaatttttagacgctttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggttttactttcgctcaaacgccccccaccgtggttttaatggca
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgtgcatgcgatttgcaacgcctagcggcagtggagcaa
ttaaaggttttgggcgaacaggtgggcgtggaagttttttatgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaaaagggctaaagaagcgcaatttgatgttttgctc
gtggatagcgcggggcgtttagccattgataaagagcttatgcaagaattaaaagaaatt
aaagaaatcttaaacccccatgaggtgctgtatgtcgcagacgcattgagcgggcaagat
ggggtcaaaagcgcgaacacctttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgacagcgattctaaagggggtatcgccttaggcatcacttaccaattaggctta
cccttgcgttttattgggagcggggaaaaaatccctgatttagatgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgcc
agcgttttaaaccctaatgaagccaaagatttgagcaaaaaactcaaaaaagggcaattc
actttcaatgactttttaaaccagattgaaaaagtgaaaaaattaggctctatgagttct
ctaatctctatgattccaggtttagggaatatggcaaacgcgctaaaagacacggattta
gaaagctctttagaagtgaaaaaaatcaaggctatggtcaattccatgaccaaaaaagag
caagaaaaccccgagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaatcgtatcatcaaacgctttgatcaagcgagcaaaatggcg
aaacgcttaacgaataaaaagggcattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacaccccctaaaatgcactga

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