KEGG   Helicobacter pylori oki128: HPOKI128_06000
Entry
HPOKI128_06000    CDS       T03724                                 
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
hpyd  Helicobacter pylori oki128
Pathway
hpyd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hpyd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HPOKI128_06000 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpyd03019]
    HPOKI128_06000 (groEL)
   03110 Chaperones and folding catalysts [BR:hpyd03110]
    HPOKI128_06000 (groEL)
   03029 Mitochondrial biogenesis [BR:hpyd03029]
    HPOKI128_06000 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hpyd04147]
    HPOKI128_06000 (groEL)
Enzymes [BR:hpyd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     HPOKI128_06000 (groEL)
Messenger RNA biogenesis [BR:hpyd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HPOKI128_06000 (groEL)
Chaperones and folding catalysts [BR:hpyd03110]
 Heat shock proteins
  HSP60 / Chaperonin
   HPOKI128_06000 (groEL)
Mitochondrial biogenesis [BR:hpyd03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    HPOKI128_06000 (groEL)
Exosome [BR:hpyd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HPOKI128_06000 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   HPOKI128_06000 (groEL)
  Exosomal proteins of breast cancer cells
   HPOKI128_06000 (groEL)
  Exosomal proteins of colorectal cancer cells
   HPOKI128_06000 (groEL)
  Exosomal proteins of bladder cancer cells
   HPOKI128_06000 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AHN38039
LinkDB
Position
complement(1215433..1217073)
AA seq 546 aa
MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDVVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISSMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI
SEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVAQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcaaaagaaatcaaattttcagatagcgcaagaaaccttttatttgaaggcgtgaga
caactccatgacgctgtcaaagtaaccatggggccaagaggcaggaatgtgttgatccaa
aaaagctatggcgctccaagcatcaccaaagacggcgtgagcgtggctaaagagattgaa
ttaagttgcccggtggctaacatgggcgctcaactcgttaaagaagtagcgagcaaaacc
gctgatgctgccggcgatggcacgaccacagcgaccgtgcttgcttatagcatctttaaa
gagggcttgaggaatatcacggctggggctaaccctattgaagtgaaacgaggcatggat
aaagccgctgaagccattattaatgagcttaaaaaagcgagcaaaaaagtaggcggtaaa
gaagaaatcacccaagtagcgaccatttctgcaaactccgatcacaatattgggaaactc
atcgctgacgctatggaaaaagtgggtaaagacggcgtgatcaccgttgaagaagctaag
ggcattgaagatgaattagatgtcgtagagggcatgcaatttgatagaggctacctctcc
ccttactttgtaacaaacgctgagaaaatgaccgctcaattggataacgcttacatcctt
ttaacggataaaaaaatctctagcatgaaagacattctcccgctactagaaaaaaccatg
aaagagggcaaaccgcttttaatcattgctgaagacattgagggcgaagctttaacgact
ctagtggtgaataaattaagaggcgtgttgaatatcgcagcggttaaagctccaggcttt
ggagacagaagaaaagaaatgctcaaagacatcgccgttttaaccggcggtcaagttatt
agcgaagaattaggcttgactttagaaaacgctgaagtggagtttttaggcaaagccgga
aggattgtgattgacaaagacaacaccacgatcgtagatggcaaaggccatagccatgat
gtcaaagacagagttgcgcaaatcaaaacccaaattgcaagcacgacaagcgattatgac
aaagaaaaattgcaagaaagattggccaaactctctggcggtgtggctgtgattaaagtg
ggcgctgcgagtgaagtggaaatgaaagagaaaaaagaccgggttgatgacgcgttgagc
gcgactaaagcggctgttgaagaaggcattgttattggcggtggtgcggctctcattcgt
gcggctcaaaaagtgcatttgaatttacacgatgatgaaaaagtgggctatgaaatcatc
atgcgcgccattaaagccccattagctcaaatcgctatcaatgccggttatgatggcggt
gtggtcgtgaatgaagtgcaaaaacacgaagggcattttggttttaacgctagcaatggc
aagtatgtggatatgtttaaagaaggcattattgaccccttaaaagtggaaaggattgct
ttacaaaatgcggtttcggtttcaagcctgcttttaaccacagaagccaccgtgcatgaa
atcaaagaagaaaaagcaaccccagcaatgcctgatatgggtggcatgggcggtatggga
ggcatgggcggcatgatgtaa

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