Helicobacter pylori 52: HPKB_0505
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Entry
HPKB_0505 CDS
T01898
Name
(GenBank) UDP-GlcNAc C6 dehydratase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
hpz
Helicobacter pylori 52
Pathway
hpz00520
Amino sugar and nucleotide sugar metabolism
hpz00541
O-Antigen nucleotide sugar biosynthesis
hpz01100
Metabolic pathways
hpz01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hpz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
HPKB_0505
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HPKB_0505
Enzymes [BR:
hpz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
HPKB_0505
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
3Beta_HSD
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
Sacchrp_dh_NADP
NmrA
KR
Shikimate_DH
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ACX99108
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All DBs
Position
complement(523959..524942)
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AA seq
327 aa
AA seq
DB search
MLDNQTILITGGTGSFGKRFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIG
DVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNEVSQV
IALSTDKAANPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFK
KLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKAL
APNTPTKIIGIRPGEKLHEVMIPKDESHLALEFEDFFIIQPTISFQTPKDYTLTRLHEKG
QKVAPDFEYSSHNNNQWLEPDDLLKLL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgctagacaaccaaacgattttaatcaccggtggcactgggagttttggcaagcgcttt
gttcgtaaagtcttagacaccaccaacgctaaaaaaatcatcgtttatagccgagatgaa
ttgaaacaaagcgaaatggccatggaatttaacgatcccaggatgcgtttttttatcggc
gatgtcagggatttagaacgcttgaattacgctttagagggcgtggatatttgtatccat
gcggccgcgctcaagcatgtgcccatcgctgaatacaaccccctagaatgcattaaaacc
aatatcatgggagcgagcaatgtgattaacgcatgcctaaaaaatgaagtgagccaggtc
atcgctctaagcaccgataaggccgctaaccccattaacctctacggcgcaaccaaattg
tgcagcgataagctctttgtgagcgcgaataactttaaaggctcttctcaaacgcaattt
agcgtggtgcgttatggtaatgtggtggggagtcgtgggagcgtggtgccgttttttaaa
aaactagtccaaaacaaagcgagtgaaatccccattaccgatatccgcatgacacgattt
tggatcactttagatgagggggtttcttttgtgcttaaaagcttgaaaagaatgcatggg
ggtgaaatttttgtgcctaaaatccctagcatgaaaatgactgatctcgctaaagcccta
gcccccaatacccctactaaaatcatcggcattcgcccaggcgaaaaactccatgaagtg
atgatccctaaagatgaaagccatttagccctagaatttgaagacttttttatcattcag
cccactataagcttccaaacgcctaaagattacacgctcaccagactccacgaaaaaggc
caaaaagtcgcccctgattttgaatacagcagccataataataaccaatggctagagcct
gatgatttattgaaattactatga
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