KEGG   Homo sapiens (human): 1301Help
Entry
1301              CDS       T01001                                 

Gene name
COL11A1, CO11A1, COLL6, STL2
Definition
(RefSeq) collagen, type XI, alpha 1
  KO
K19721  
collagen, type V/XI/XXIV/XXVII, alpha
Organism
hsa  Homo sapiens (human)
Pathway
Protein digestion and absorption
Disease
H00519  
Type XI collagenopathies
H00805  
Vitreoretinal degeneration
Brite
KEGG Orthology (KO) [BR:hsa00001]
 Organismal Systems
  Digestive system
   04974 Protein digestion and absorption
    1301 (COL11A1)
Glycosaminoglycan binding proteins [BR:hsa00536]
 Heparan sulfate/Haparin
  Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
   1301 (COL11A1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
OMIM: 
HGNC: 
HPRD: 
Ensembl: 
Vega: 
UniProt: 
LinkDB All DBs
Position
1p21
AA seq 1767 aa AA seqDB search
MEPWSSRWKTKRWLWDFTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYS
PDCDSSAPKAAQAQEPQIDEANIVDDFQEYNYGTMESYQTEAPRHVSGTNEPNPVEEIFT
EEYLTGEDYDSQRKNSEDTLYENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNE
EFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQ
GPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAI
LQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKR
GRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEI
GPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQ
GLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYP
GPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRA
GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPR
GQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP
GKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLP
GAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP
GERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPA
GSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMF
GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQ
GPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPP
GDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPP
GKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQ
GLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQ
GSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP
GEVIQPLPILSSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGT
QTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVR
ISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAA
WYDVSSGSYDKALRFLGSNDEEMSYDNNPFIKTLYDGCASRKGYEKTVIEINTPKIDQVP
IVDVMINDFGDQNQKFGFEVGPVCFLG
NT seq 5304 nt NT seq  +upstreamnt  +downstreamnt
atggagccgtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccgtaaca
accctcgcattgaccttcctcttccaagctagagaggtcagaggagctgctccagttgat
gtactaaaagcactagattttcacaattctccagagggaatatcaaaaacaacgggattt
tgcacaaacagaaagaattctaaaggctcagatactgcttacagagtttcaaagcaagca
caactcagtgccccaacaaaacagttatttccaggtggaactttcccagaagacttttca
atactatttacagtaaaaccaaaaaaaggaattcagtctttccttttatctatatataat
gagcatggtattcagcaaattggtgttgaggttgggagatcacctgtttttctgtttgaa
gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgct
gacgggaagtggcatcgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt
gattgtaagaagaaaaccacgaaaccacttgatagaagtgagagagcaattgttgatacc
aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatt
cagcagtttttgatcacaggtgatcccaaggcagcatatgactactgtgagcattatagt
ccagactgtgactcttcagcacccaaggctgctcaagctcaggaacctcagatagatgag
gcaaacatcgttgatgattttcaagaatacaactatggaacaatggaaagttaccagaca
gaagctcctaggcatgtttctgggacaaatgagccaaatccagttgaagaaatatttact
gaagaatatctaacgggagaggattatgattcccagaggaaaaattctgaggatacacta
tatgaaaacaaagaaatagacggcagggattctgatcttctggtagatggagatttaggc
gaatatgatttttatgaatataaagaatatgaagataaaccaacaagcccccctaatgaa
gaatttggtccaggtgtaccagcagaaactgatattacagaaacaagcataaatggccat
ggtgcatatggagagaaaggacagaaaggagaaccagcagtggttgagcctggtatgctt
gtcgaaggaccaccaggaccagcaggacctgcaggtattatgggtcctccaggtctacaa
ggccccactggaccccctggtgaccctggcgataggggccccccaggacgtcctggctta
ccaggggctgatggtctacctggtcctcctggtactatgttgatgttaccgttccgttat
ggtggtgatggttccaaaggaccaaccatctctgctcaggaagctcaggctcaagctatt
cttcagcaggctcggattgctctgagaggcccacctggcccaatgggtctaactggaaga
ccaggtcctgtgggggggcctggttcatctggggccaaaggtgagagtggtgatccaggt
cctcagggccctcgaggcgtccagggtccccctggtccaacgggaaaacctggaaaaagg
ggtcgtccaggtgcagatggaggaagaggaatgccaggagaacctggggcaaagggagat
cgagggtttgatggacttccgggtctgccaggtgacaaaggtcacaggggtgaacgaggt
cctcaaggtcctccaggtcctcctggtgatgatggaatgaggggagaagatggagaaatt
ggaccaagaggtcttccaggtgaagctggcccacgaggtttgctgggtccaaggggaact
ccaggagctccagggcagcctggtatggcaggtgtagatggccccccaggaccaaaaggg
aacatgggtccccaaggggagcctgggcctccaggtcaacaagggaatccaggacctcag
ggtcttcctggtccacaaggtccaattggtcctcctggtgaaaaaggaccacaaggaaaa
ccaggacttgctggacttcctggtgctgatgggcctcctggtcatcctgggaaagaaggc
cagtctggagaaaagggggctctgggtccccctggtccacaaggtcctattggatacccg
ggcccccggggagtaaagggagcagatggtgtcagaggtctcaagggatctaaaggtgaa
aagggtgaagatggttttccaggattcaaaggtgacatgggtctaaaaggtgacagagga
gaagttggtcaaattggcccaagaggggaagatggccctgaaggacccaaaggtcgagca
ggcccaactggagacccaggtccttcaggtcaagcaggagaaaagggaaaacttggagtt
ccaggattaccaggatatccaggaagacaaggtccaaagggttccactggattccctggg
tttccaggtgccaatggagagaaaggtgcacggggagtagctggcaaaccaggccctcgg
ggtcagcgtggtccaacgggtcctcgaggttcaagaggtgcaagaggtcccactgggaaa
cctgggccaaagggcacttcaggtggcgatggccctcctggccctccaggtgaaagaggt
cctcaaggacctcagggtccagttggattccctggaccaaaaggccctcctggaccacct
gggaaggatgggctgccaggacaccctgggcaacgtggggagactggatttcaaggcaag
accggccctcctgggccagggggagtggttggaccacagggaccaaccggtgagactggt
ccaataggggaacgtgggcatcctggccctcctggccctcctggtgagcaaggtcttcct
ggtgctgcaggaaaagaaggtgcaaagggtgatccaggtcctcaaggtatctcagggaaa
gatggaccagcaggattacgtggtttcccaggggaaagaggtcttcctggagctcagggt
gcacctggactgaaaggaggggaaggtccccagggcccaccaggtccagttggctcacca
ggagaacgtgggtcagcaggtacagctggcccaattggtttaccagggcgcccgggacct
cagggtcctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccccaaggg
cctgcagggagagatggagttcaaggtcctgttggtctcccagggccagctggtcctgcc
ggctcccctggggaagacggagacaagggtgaaattggtgagccgggacaaaaaggcagc
aagggtgacaagggagaaaatggccctcccggtcccccaggtcttcaaggaccagttggt
gcccctggaattgctggaggtgatggtgaaccaggtcctagaggacagcaggggatgttt
gggcaaaaaggtgatgagggtgccagaggcttccctggacctcctggtccaataggtctt
cagggtctgccaggcccacctggtgaaaaaggtgaaaatggggatgttggtcccatgggg
ccacctggtcctccaggcccaagaggccctcaaggtcccaatggagctgatggaccacaa
ggacccccagggtctgttggttcagttggtggtgttggagaaaagggtgaacctggagaa
gcagggaacccagggcctcctggggaagcaggtgtaggcggtcccaaaggagaaagagga
gagaaaggggaagctggtccacctggagctgctggacctccaggtgccaaggggccacca
ggtgatgatggccctaagggtaacccgggtcctgttggttttcctggagatcctggtcct
cctggggaacctggccctgcaggtcaagatggtgttggtggtgacaagggtgaagatgga
gatcctggtcaaccgggtcctcctggcccatctggtgaggctggcccaccaggtcctcct
ggaaaacgaggtcctcctggagctgcaggtgcagagggaagacaaggtgaaaaaggtgct
aagggggaagcaggtgcagaaggtcctcctggaaaaaccggcccagtcggtcctcaggga
cctgcaggaaagcctggtccagaaggtcttcggggcatccctggtcctgtgggagaacaa
ggtctccctggagctgcaggccaagatggaccacctggtcctatgggacctcctggctta
cctggtctcaaaggtgaccctggctccaagggtgaaaagggacatcctggtttaattggc
ctgattggtcctccaggagaacaaggggaaaaaggtgaccgagggctccctggaactcaa
ggatctccaggagcaaaaggggatgggggaattcctggtcctgctggtcccttaggtcca
cctggtcctccaggtttaccaggtcctcaaggcccaaagggtaacaaaggctctactgga
cccgctggccagaaaggtgacagtggtcttccagggcctcctgggtctccaggtccacct
ggtgaagtcattcagcctttaccaatcttgtcctccaaaaaaacgagaagacatactgaa
ggcatgcaagcagatgcagatgataatattcttgattactcggatggaatggaagaaata
tttggttccctcaattccctgaaacaagacattgagcatatgaaatttccaatgggtact
cagaccaatccagcccgaacttgtaaagacctgcaactcagccatcctgacttcccagat
ggtgaatattggattgatcctaaccaaggttgctcaggagattccttcaaagtttactgt
aatttcacatctggtggtgagacttgcatttatccagacaaaaaatctgagggagtaaga
atttcatcatggccaaaggagaaaccaggaagttggtttagtgaatttaagaggggaaaa
ctgctttcatacttagatgttgaaggaaattccatcaatatggtgcaaatgacattcctg
aaacttctgactgcctctgctcggcaaaatttcacctaccactgtcatcagtcagcagcc
tggtatgatgtgtcatcaggaagttatgacaaagcacttcgcttcctgggatcaaatgat
gaggagatgtcctatgacaataatccttttatcaaaacactgtatgatggttgtgcgtcc
agaaaaggctatgaaaagactgtcattgaaatcaatacaccaaaaattgatcaagtacct
attgttgatgtcatgatcaatgactttggtgatcagaatcagaagttcggatttgaagtt
ggtcctgtttgttttcttggctaa

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