KEGG   Homo sapiens (human): 1301Help
Entry
1301              CDS       T01001                                 

Gene name
COL11A1, CO11A1, COLL6, STL2
Definition
collagen, type XI, alpha 1
Orthology
K06236  
collagen, type I/II/III/V/XI/XXIV/XXVII, alpha
Organism
hsa  Homo sapiens (human)
Pathway
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Protein digestion and absorption
Amoebiasis
Disease
H00519  
Type XI collagenopathies
H00805  
Vitreoretinal degeneration
Class
Environmental Information Processing; Signal transduction; PI3K-Akt signaling pathway [PATH:hsa04151]
Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:hsa04512]
Cellular Processes; Cell communication; Focal adhesion [PATH:hsa04510]
Organismal Systems; Digestive system; Protein digestion and absorption [PATH:hsa04974]
Human Diseases; Infectious diseases; Amoebiasis [PATH:hsa05146]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
OMIM: 
HGNC: 
HPRD: 
Ensembl: 
Vega: 
UniProt: 
LinkDB All DBs
Position
1p21
AA seq 1767 aa AA seqDB search
MEPWSSRWKTKRWLWDFTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYS
PDCDSSAPKAAQAQEPQIDEANIVDDFQEYNYGTMESYQTEAPRHVSGTNEPNPVEEIFT
EEYLTGEDYDSQRKNSEDTLYENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPPNE
EFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGIMGPPGLQ
GPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAI
LQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKR
GRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEI
GPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQ
GLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYP
GPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRA
GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPR
GQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPP
GKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLP
GAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSP
GERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPA
GSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMF
GQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQ
GPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPP
GDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPP
GKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQ
GLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQ
GSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPP
GEVIQPLPILSSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGT
QTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVR
ISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAA
WYDVSSGSYDKALRFLGSNDEEMSYDNNPFIKTLYDGCASRKGYEKTVIEINTPKIDQVP
IVDVMINDFGDQNQKFGFEVGPVCFLG
NT seq 5304 nt NT seq  +upstreamnt  +downstreamnt
atggagccgtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccgtaaca
accctcgcattgaccttcctcttccaagctagagaggtcagaggagctgctccagttgat
gtactaaaagcactagattttcacaattctccagagggaatatcaaaaacaacgggattt
tgcacaaacagaaagaattctaaaggctcagatactgcttacagagtttcaaagcaagca
caactcagtgccccaacaaaacagttatttccaggtggaactttcccagaagacttttca
atactatttacagtaaaaccaaaaaaaggaattcagtctttccttttatctatatataat
gagcatggtattcagcaaattggtgttgaggttgggagatcacctgtttttctgtttgaa
gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgct
gacgggaagtggcatcgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt
gattgtaagaagaaaaccacgaaaccacttgatagaagtgagagagcaattgttgatacc
aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatt
cagcagtttttgatcacaggtgatcccaaggcagcatatgactactgtgagcattatagt
ccagactgtgactcttcagcacccaaggctgctcaagctcaggaacctcagatagatgag
gcaaacatcgttgatgattttcaagaatacaactatggaacaatggaaagttaccagaca
gaagctcctaggcatgtttctgggacaaatgagccaaatccagttgaagaaatatttact
gaagaatatctaacgggagaggattatgattcccagaggaaaaattctgaggatacacta
tatgaaaacaaagaaatagacggcagggattctgatcttctggtagatggagatttaggc
gaatatgatttttatgaatataaagaatatgaagataaaccaacaagcccccctaatgaa
gaatttggtccaggtgtaccagcagaaactgatattacagaaacaagcataaatggccat
ggtgcatatggagagaaaggacagaaaggagaaccagcagtggttgagcctggtatgctt
gtcgaaggaccaccaggaccagcaggacctgcaggtattatgggtcctccaggtctacaa
ggccccactggaccccctggtgaccctggcgataggggccccccaggacgtcctggctta
ccaggggctgatggtctacctggtcctcctggtactatgttgatgttaccgttccgttat
ggtggtgatggttccaaaggaccaaccatctctgctcaggaagctcaggctcaagctatt
cttcagcaggctcggattgctctgagaggcccacctggcccaatgggtctaactggaaga
ccaggtcctgtgggggggcctggttcatctggggccaaaggtgagagtggtgatccaggt
cctcagggccctcgaggcgtccagggtccccctggtccaacgggaaaacctggaaaaagg
ggtcgtccaggtgcagatggaggaagaggaatgccaggagaacctggggcaaagggagat
cgagggtttgatggacttccgggtctgccaggtgacaaaggtcacaggggtgaacgaggt
cctcaaggtcctccaggtcctcctggtgatgatggaatgaggggagaagatggagaaatt
ggaccaagaggtcttccaggtgaagctggcccacgaggtttgctgggtccaaggggaact
ccaggagctccagggcagcctggtatggcaggtgtagatggccccccaggaccaaaaggg
aacatgggtccccaaggggagcctgggcctccaggtcaacaagggaatccaggacctcag
ggtcttcctggtccacaaggtccaattggtcctcctggtgaaaaaggaccacaaggaaaa
ccaggacttgctggacttcctggtgctgatgggcctcctggtcatcctgggaaagaaggc
cagtctggagaaaagggggctctgggtccccctggtccacaaggtcctattggatacccg
ggcccccggggagtaaagggagcagatggtgtcagaggtctcaagggatctaaaggtgaa
aagggtgaagatggttttccaggattcaaaggtgacatgggtctaaaaggtgacagagga
gaagttggtcaaattggcccaagaggggaagatggccctgaaggacccaaaggtcgagca
ggcccaactggagacccaggtccttcaggtcaagcaggagaaaagggaaaacttggagtt
ccaggattaccaggatatccaggaagacaaggtccaaagggttccactggattccctggg
tttccaggtgccaatggagagaaaggtgcacggggagtagctggcaaaccaggccctcgg
ggtcagcgtggtccaacgggtcctcgaggttcaagaggtgcaagaggtcccactgggaaa
cctgggccaaagggcacttcaggtggcgatggccctcctggccctccaggtgaaagaggt
cctcaaggacctcagggtccagttggattccctggaccaaaaggccctcctggaccacct
gggaaggatgggctgccaggacaccctgggcaacgtggggagactggatttcaaggcaag
accggccctcctgggccagggggagtggttggaccacagggaccaaccggtgagactggt
ccaataggggaacgtgggcatcctggccctcctggccctcctggtgagcaaggtcttcct
ggtgctgcaggaaaagaaggtgcaaagggtgatccaggtcctcaaggtatctcagggaaa
gatggaccagcaggattacgtggtttcccaggggaaagaggtcttcctggagctcagggt
gcacctggactgaaaggaggggaaggtccccagggcccaccaggtccagttggctcacca
ggagaacgtgggtcagcaggtacagctggcccaattggtttaccagggcgcccgggacct
cagggtcctcctggtccagctggagagaaaggtgctcctggagaaaaaggtccccaaggg
cctgcagggagagatggagttcaaggtcctgttggtctcccagggccagctggtcctgcc
ggctcccctggggaagacggagacaagggtgaaattggtgagccgggacaaaaaggcagc
aagggtgacaagggagaaaatggccctcccggtcccccaggtcttcaaggaccagttggt
gcccctggaattgctggaggtgatggtgaaccaggtcctagaggacagcaggggatgttt
gggcaaaaaggtgatgagggtgccagaggcttccctggacctcctggtccaataggtctt
cagggtctgccaggcccacctggtgaaaaaggtgaaaatggggatgttggtcccatgggg
ccacctggtcctccaggcccaagaggccctcaaggtcccaatggagctgatggaccacaa
ggacccccagggtctgttggttcagttggtggtgttggagaaaagggtgaacctggagaa
gcagggaacccagggcctcctggggaagcaggtgtaggcggtcccaaaggagaaagagga
gagaaaggggaagctggtccacctggagctgctggacctccaggtgccaaggggccacca
ggtgatgatggccctaagggtaacccgggtcctgttggttttcctggagatcctggtcct
cctggggaacctggccctgcaggtcaagatggtgttggtggtgacaagggtgaagatgga
gatcctggtcaaccgggtcctcctggcccatctggtgaggctggcccaccaggtcctcct
ggaaaacgaggtcctcctggagctgcaggtgcagagggaagacaaggtgaaaaaggtgct
aagggggaagcaggtgcagaaggtcctcctggaaaaaccggcccagtcggtcctcaggga
cctgcaggaaagcctggtccagaaggtcttcggggcatccctggtcctgtgggagaacaa
ggtctccctggagctgcaggccaagatggaccacctggtcctatgggacctcctggctta
cctggtctcaaaggtgaccctggctccaagggtgaaaagggacatcctggtttaattggc
ctgattggtcctccaggagaacaaggggaaaaaggtgaccgagggctccctggaactcaa
ggatctccaggagcaaaaggggatgggggaattcctggtcctgctggtcccttaggtcca
cctggtcctccaggtttaccaggtcctcaaggcccaaagggtaacaaaggctctactgga
cccgctggccagaaaggtgacagtggtcttccagggcctcctgggtctccaggtccacct
ggtgaagtcattcagcctttaccaatcttgtcctccaaaaaaacgagaagacatactgaa
ggcatgcaagcagatgcagatgataatattcttgattactcggatggaatggaagaaata
tttggttccctcaattccctgaaacaagacattgagcatatgaaatttccaatgggtact
cagaccaatccagcccgaacttgtaaagacctgcaactcagccatcctgacttcccagat
ggtgaatattggattgatcctaaccaaggttgctcaggagattccttcaaagtttactgt
aatttcacatctggtggtgagacttgcatttatccagacaaaaaatctgagggagtaaga
atttcatcatggccaaaggagaaaccaggaagttggtttagtgaatttaagaggggaaaa
ctgctttcatacttagatgttgaaggaaattccatcaatatggtgcaaatgacattcctg
aaacttctgactgcctctgctcggcaaaatttcacctaccactgtcatcagtcagcagcc
tggtatgatgtgtcatcaggaagttatgacaaagcacttcgcttcctgggatcaaatgat
gaggagatgtcctatgacaataatccttttatcaaaacactgtatgatggttgtgcgtcc
agaaaaggctatgaaaagactgtcattgaaatcaatacaccaaaaattgatcaagtacct
attgttgatgtcatgatcaatgactttggtgatcagaatcagaagttcggatttgaagtt
ggtcctgtttgttttcttggctaa

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