Homo sapiens (human): 29894
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Entry
29894 CDS
T01001
Symbol
CPSF1, CPSF160, HSU37012, MYP27, P/cl.18
Name
(RefSeq) cleavage and polyadenylation specific factor 1
KO
K14401
cleavage and polyadenylation specificity factor subunit 1
Organism
hsa
Homo sapiens (human)
Pathway
hsa03015
mRNA surveillance pathway
Disease
H02041
Myopia
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
29894 (CPSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsa03021
]
29894 (CPSF1)
03019 Messenger RNA biogenesis [BR:
hsa03019
]
29894 (CPSF1)
Transcription machinery [BR:
hsa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
29894 (CPSF1)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
29894 (CPSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
MMS1_N
UspB
Motif
Other DBs
NCBI-GeneID:
29894
NCBI-ProteinID:
NP_037423
OMIM:
606027
HGNC:
2324
Ensembl:
ENSG00000071894
UniProt:
Q10570
Structure
PDB
LinkDB
All DBs
Position
8:complement(144393231..144409335)
Genome browser
AA seq
1443 aa
AA seq
DB search
MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK
AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL
HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG
QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSI
VAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVAL
NSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAF
HFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSK
KKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAV
GEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIA
PVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGF
ATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMS
AEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDE
LGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAE
PTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQ
GELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNIN
FREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGA
LRLHPMAIDGPVDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRC
TAHYVAYHVESKVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLIS
PVSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRIL
IMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASEL
TGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDF
MVDNAQLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGAT
EGLSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRA
FRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRVT
AHF
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgtgtacaaacaggcgcatccgcccaccggtctggagttctccatgtactgc
aacttcttcaacaacagcgagcgcaacctggtagtggccgggacctcgcagctctacgtg
taccgcctcaaccgcgacgccgaggctctgaccaagaatgacaggagcacagaggggaag
gcccaccgggagaagctcgagcttgctgcctccttctccttctttggcaacgtcatgtcc
atggccagcgtgcagctggcaggagccaagcgggatgccctgctcctaagcttcaaggat
gccaagctgtctgtggtggagtacgacccgggcacccatgacctgaagaccctgtcactg
cactactttgaggagcctgagcttcgggacgggtttgtgcagaatgtacacacgccgcga
gtgcgggtggaccccgacgggcgctgtgcagccatgcttgtctacggcacgcggctggtg
gtcctgcccttccgcagggagagcctggctgaggagcacgaggggctcgtgggtgagggg
cagaggtccagcttcctgcccagctacatcatcgacgtgcgggccctagacgagaagctg
ctcaacatcatcgacctgcagttcctgcatggctactacgagcctaccctcctcatcctg
tttgagcccaaccagacctggcctgggcgcgtggccgtgcggcaggacacgtgctccatt
gtggccatctcactgaacatcacgcagaaggtgcaccccgtcatctggtccctcaccagc
ctgccctttgactgcacccaggctctggctgtgcccaagcccataggtggggtggtggtg
tttgccgtcaactcgctgttgtacctgaaccagagcgtccccccgtatggcgtggctctc
aacagcctcaccacaggaaccacggctttcccgcttcgcacccaggagggtgtgcggatc
accctggactgcgcccaggccaccttcatctcctacgacaagatggtcatctccctcaag
ggcggcgagatctacgtgctgaccctcatcaccgacggcatgcgcagtgtccgagcgttc
cactttgacaaggcggccgccagcgtcctcaccaccagcatggtcaccatggagcccggg
tacctgttcctgggttctcgcctgggcaattccctcctcctcaagtacacggagaagctg
caggagcccccggccagtgctgtccgtgaggctgccgacaaggaagagcctccctcaaag
aagaagcgagtggatgcgacggccggctggtcagctgcgggtaagtcggtgccgcaggat
gaggtggacgagattgaagtgtacggcagcgaggcccagtcgggaacacagctggccacc
tactcctttgaggtgtgtgacagcatcctgaacattggaccctgtgccaatgccgccgtg
ggcgagcctgccttcctctctgaagagtttcagaacagccccgagccggacctggagatt
gtggtttgctccggccacgggaagaacggggctttgtcggtgctgcagaagagcatccgg
ccccaggtggtgacaacctttgagcttcccggctgctatgacatgtggacagtcatcgcc
ccggtgcgtaaggaggaggaggacaatcccaagggggagggcacagagcaggaacccagc
accacccctgaagcagacgacgacggccgcagacacggattcctgattctgagccgggaa
gactccaccatgatcctgcagacggggcaggagatcatggagctggacaccagtggcttc
gccactcagggccccacggtctttgctgggaacatcggggacaaccgctacattgtccaa
gtgtcaccactgggcatccgcctgctggaaggagtgaatcagctgcacttcatccccgtg
gacctgggcgcccccatcgtgcagtgcgccgtggccgacccctatgtggtcatcatgagt
gccgagggccacgtcaccatgttcctgctgaagagtgactcctacggtggccgccaccac
cgcctggcgctgcacaagcccccgctgcaccatcagtccaaggtgattacgctgtgcctg
taccgagacctcagcggcatgttcaccactgagagccgcctgggtggggcccgtgacgag
ctcgggggccgcagtggcccggaggccgagggcctgggctcagagactagccccacagtg
gatgacgaggaggagatgctgtatggggattcgggctccctcttcagccccagcaaggag
gaggcccgaagaagcagccagccccctgctgaccgggaccctgcacccttccgggcagag
cctacccactggtgcctgctggtgcgggagaatggcaccatggagatctaccagcttccc
gactggcggctggtgttcctggtgaagaacttccctgtggggcagcgggtccttgtggac
agctcctttggacagcccactacacagggcgaggcccgcagggaggaggccacgcgccag
ggggagctgcccctcgtcaaggaggtgctgctggtggcgctgggcagccgccagagcagg
ccctacctgctggtgcatgtggaccaagagctgcttatctacgaggccttcccccacgac
tctcagctcggccagggcaatctcaaagtccgctttaagaaggtccctcacaacatcaac
ttccgtgagaagaagccaaagccatccaagaagaaagcagaaggtggcggcgcagaggag
ggggctggggcccggggccgcgtggcgcgtttccgctacttcgaggatatttatggctac
tcaggggtcttcatctgcggcccctcccctcactggctcttggtgaccggccgaggggct
ctgcggctacaccccatggccatcgacggcccggtcgactctttcgctccattccacaat
gtcaactgtccccgcggcttcctgtacttcaacagacagggcgagctgaggatcagtgtc
ctgcctgcctacctgtcctatgatgccccatggcctgtcaggaagatcccgctgcgctgc
acggcccactatgtggcttaccacgtggagtctaaggtgtatgctgtggccaccagcacc
aacacgccgtgtgcccgcatcccacgcatgactggcgaggagaaggagtttgagaccatc
gagagagatgagcggtacatccacccccagcaggaggccttctccatccagctcatctcc
ccggtcagctgggaggctattcccaatgccaggatcgagctgcaggagtgggagcatgtg
acctgcatgaagacagtgtctctgcgcagtgaggagaccgtgtcgggcctcaaaggctac
gtggccgccgggacctgcctcatgcagggggaggaggtcacgtgccgagggcggatcttg
atcatggatgtgattgaggtggtgcccgagcctggccagcccttgaccaagaacaagttc
aaagtcctttacgagaaggagcagaaggggcccgtgaccgccctgtgccactgcaatggc
cacctggtgtcggccatcggccagaagattttcctgtggagcctgcgggccagcgagctg
acgggcatggccttcatcgacacgcagctctacatacaccagatgatcagcgtcaagaac
ttcatcctggcagccgacgtcatgaagagcatttcgctgctgcgctaccaggaggaaagc
aagacgctgagcctggtgtcgcgggatgccaagcccctggaggtgtacagcgtggacttc
atggtggacaatgcccagctgggttttctggtgtctgaccgcgaccgcaacctcatggtg
tacatgtacctgcccgaagccaaggagagtttcgggggcatgcgcctgctgcgtcgggca
gacttccacgtgggtgcccacgtgaacacgttctggaggaccccgtgccggggggccact
gaagggctcagcaaaaagtcggtcgtgtgggagaataagcacatcacgtggtttgccacc
ctggacggcggcatcgggctgctgctgcccatgcaggagaagacctaccggcggctgctg
atgctgcagaacgcgctgaccaccatgctgccacaccacgccggcctcaacccccgcgcc
ttccggatgctgcacgtggaccgccgcaccctccagaatgccgtgcgcaacgtgctggat
ggggagctgctcaaccgctacctgtacctgagcaccatggagcgcagcgagctagccaag
aagatcggcaccacaccagacataatcctggacgacttgctggagacggaccgcgtcacc
gcccacttctag
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