Herbaspirillum seropedicae SmR1: Hsero_1379
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Entry
Hsero_1379 CDS
T01268
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (large chain) protein
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00240
Pyrimidine metabolism
hse00250
Alanine, aspartate and glutamate metabolism
hse01100
Metabolic pathways
hse01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Hsero_1379 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Hsero_1379 (carB)
Enzymes [BR:
hse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Hsero_1379 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ADJ62895
UniProt:
D8IP75
LinkDB
All DBs
Position
1574866..1578099
Genome browser
AA seq
1077 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM
ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP
EAIDKAEDRSKFKEAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG
IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP
RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTTDRELIE
KELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDVALESL
DKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLGVRPVFKRVDTCAGEFSTDTAYMY
STYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNCNPET
VSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGVPIVGTS
PDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYVLGGRAM
EIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVMEHIEQA
GVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDGKTVDTV
FVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVKEAVFPF
VKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKNSDKPRA
VQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIALVVNTV
EEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLHKAIH
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgtactgacatcaaaagcatcctgatcattggcgctggcccgatcatcatc
ggccaggcctgcgaattcgactattccggcgcccaggcctgcaaggccctgcgtgaagaa
ggtttcaaggtcatcctggtcaacagcaacccggccaccatcatgaccgacccggaaatg
gccgacgccacctacatcgagccgatcacctggcaagcggtggaacgcatcatcgccaag
gaaaagccggacgccatcctgccgaccatgggcggccagaccgcgctgaactgcgcactg
gacctgcatcgccacggcgtgctagagaagtacaaggtcgaactgatcggcgccaccccg
gaagccatcgacaaggccgaggaccgctccaagttcaaggaagcgatgaccaagatcggc
ctgggttcggcccgctccggcgtgtcgcacacgatggaagaatcgtgggcggtgcagaag
accatcggcttcccggtcatcatccgtccgtccttcaccatgggcggcaccggcggtggc
atcgcctacaacgccgaggaattcgagaccatctgcaagcgcggcctggaggcttcgccg
acgtccgaactgctgatcgaggagtcgctgatcggctggaaggaatacgaaatggaagtg
gtccgcgacaaggcggacaactgcatcatcgtctgctccatcgaaaacctggacccgatg
ggcgtgcacaccggcgactccatcacggtggcgcccgcacagacgctgaccgacaaggaa
taccagatcatgcgtaacgcctcgctggcggtgctgcgtgaaatcggtgtggataccggc
ggctccaacgtgcagttctcggtcaacccggccgatggtcgcatgatcgtcatcgaaatg
aacccgcgcgtctcgcgttcctcggcgctggcctccaaggccaccggcttcccgatcgcc
aagatcgccgccaagctggccgtgggcttcacgctcgatgaactgcgcaatgagatcacc
ggcggtgccaccccggcgtccttcgagccgtccatcgactacgtcgtgaccaagatcccg
cgcttcaccttcgagaaattcccgcaggcggacaagcacctgaccacccagatgaagtcc
gtgggtgaggtgatggccatcggccgtaccttccaggaatccttccagaaagccctgcgt
ggcctggaagtgggcgtggacggcatgaacgaaaagaccaccgaccgcgaactgatcgag
aaggaactgggcgaacccggtccggaccgcatctggtacgtgggcgatgcctttgcccaa
ggcttctcgttggaagaagtgcacggcctgacgcacatcgacccgtggttcctgtcgcag
atcaaggagatcgtcgacatcgaactgtggctggaaaaggatgtggcgctggagtcgctg
gacaaggccaccctgttccagctgaagcagaagggtttctcggatcgccgcctggccaag
ctgttgaagaccactgacaccgccgtgcgcgagcagcgcaagaagctgggcgtgcgtccg
gtcttcaagcgcgtcgatacctgtgcgggcgagttctcgaccgataccgcctacatgtat
tcgacctatgacgaagagtgcgaatccaacccgaccgacaagaagaagatcatggtgctg
ggcggtggtccgaaccgtatcggccagggcatcgagttcgactactgctgcgtgcatgcg
gcgctggccatgcgtgacgatggctacgaaaccatcatggtcaactgcaacccggaaacc
gtctcgaccgactacgacacctccgaccgcctgtacttcgaaccggtgacgctggaagac
gtgctggaaatcgtcgacaaggaaaagccggtcggcgtgatcgtccagtacggcggccag
accccgctgaagctggcgctggacctggaagccaatggcgtgcccatcgtcggcacgtcg
cccgacatgatcgacgccgccgaagaccgcgagcgtttccagaagctgctgcaggacctg
ggcctgcgccagccgcccaaccgtaccgcccgtaccgaagccgacgcgctgcaactggcg
caggaaatcggttatccgctggtggtgcgcccgtcctatgtgctgggtggccgcgccatg
gaaatcgtccacgagcagcgtgacctggagcgttacatgcgcgaagccgtcaaggtctcg
catgattcgccggtgttgctggaccgcttcctgaacgatgccatcgaagtggacgtggat
tgcctctccgacggagagcgcaccttcatcggcggcgtgatggaacacatcgaacaagcc
ggcgtgcactcgggcgactcggcctgctcgctgccgccgtattcgctgtccaaggacacc
atcgaagaactgaagcgccagaccgcactgatggccaagggcctgaacgtggtcggcctg
atgaacgtgcagttcgccatccagcaaagcgaagtcgatggcaagactgtcgataccgtc
ttcgtgctggaagtgaacccgcgcgcctcgcgtaccgtgcccttcgtctccaaggccacc
ggcctgcaactggccaagatcgcagcgcgctgcatggtcggccagtcgctggacagccag
ggcatcaagaacgaagtggtgccgccttactacagcgtcaaggaagccgtattcccgttc
gtgaagttcccgggtgtggataccatcctcggccccgagatgaagtccaccggcgaagtc
atgggggtgggcaagaccttcggcgaagccttcgtgaagtcgcagatgggcgccggcgtg
aagctgccgaagtcgggcaaggtcttcctgtcggtgaagaacagcgacaagccgcgtgcc
gtgcaagtggcgcgcgacctggtggcgctgggcttctcgatcgtcgcgaccaaaggtacg
gctgccgccatcagcgctgccggcatcccggtggccaccgtcaacaaggtggtggaaggc
cgtccgcacatcgtggacatggtcaagaacaacgagatcgccctggtggtcaacaccgtg
gaagaaaagcgcaacgccattgccgactccggagccatccgtacctcggccctggccgcc
cgcgtgaccaccttcaccaccatcgccggtgctgaagcggcagtggaaggtatgcgccat
ctggagtccttggacgtctacgatttacaaggcctgcataaagctatacactaa
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